T. Cokelaer
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/CNORfuzzy |
| git_branch: RELEASE_3_14 |
| git_last_commit: d6315a5 |
| git_last_commit_date: 2021-10-26 12:04:17 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:48 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the CNORfuzzy package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CNORfuzzy.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 353/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CNORfuzzy 1.36.0 (landing page) T. Cokelaer
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: CNORfuzzy |
| Version: 1.36.0 |
| Command: rm -rf CNORfuzzy.buildbin-libdir && mkdir CNORfuzzy.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh CNORfuzzy_1.36.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R CNORfuzzy.buildbin-libdir |
| StartedAt: 2022-04-12 20:30:37 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 20:30:55 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 18.6 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: CNORfuzzy_1.36.0.tgz |
| PackageFileSize: 679.8 KiB |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf CNORfuzzy.buildbin-libdir && mkdir CNORfuzzy.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh CNORfuzzy_1.36.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R CNORfuzzy.buildbin-libdir
###
##############################################################################
##############################################################################
>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=CNORfuzzy.buildbin-libdir CNORfuzzy_1.36.0.tar.gz'
>>>>>>>
* installing *source* package ‘CNORfuzzy’ ...
** using staged installation
** libs
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c simulatorT1.c -o simulatorT1.o
simulatorT1.c:320:28: warning: equality comparison with extraneous parentheses [-Wparentheses-equality]
if((track_cond == nCond)) {
~~~~~~~~~~~^~~~~~~~
simulatorT1.c:320:28: note: remove extraneous parentheses around the comparison to silence this warning
if((track_cond == nCond)) {
~ ^ ~
simulatorT1.c:320:28: note: use '=' to turn this equality comparison into an assignment
if((track_cond == nCond)) {
^~
=
1 warning generated.
clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o CNORfuzzy.so simulatorT1.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-3.14-bioc/meat/CNORfuzzy.buildbin-libdir/00LOCK-CNORfuzzy/00new/CNORfuzzy/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CNORfuzzy)
>>>>>>>
>>>>>>> FIXING LINKS FOR CNORfuzzy.buildbin-libdir/CNORfuzzy/libs/CNORfuzzy.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libgcc_s.1.dylib" "CNORfuzzy.buildbin-libdir/CNORfuzzy/libs/CNORfuzzy.so"
install_name_tool -change "/usr/local/lib/libgfortran.5.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libgfortran.5.dylib" "CNORfuzzy.buildbin-libdir/CNORfuzzy/libs/CNORfuzzy.so"
install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libquadmath.0.dylib" "CNORfuzzy.buildbin-libdir/CNORfuzzy/libs/CNORfuzzy.so"