Diana LOW
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/CONFESS |
| git_branch: RELEASE_3_14 |
| git_last_commit: f55571a |
| git_last_commit_date: 2021-10-26 12:26:56 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:22 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the CONFESS package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CONFESS.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 384/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CONFESS 1.22.0 (landing page) Diana LOW
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: CONFESS |
| Version: 1.22.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CONFESS_1.22.0.tar.gz && rm -rf CONFESS.buildbin-libdir && mkdir CONFESS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CONFESS.buildbin-libdir CONFESS_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CONFESS_1.22.0.zip && rm CONFESS_1.22.0.tar.gz CONFESS_1.22.0.zip |
| StartedAt: 2022-04-12 07:31:56 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:34:22 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 145.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CONFESS_1.22.0.tar.gz && rm -rf CONFESS.buildbin-libdir && mkdir CONFESS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CONFESS.buildbin-libdir CONFESS_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CONFESS_1.22.0.zip && rm CONFESS_1.22.0.tar.gz CONFESS_1.22.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
11 1321k 11 151k 0 0 463k 0 0:00:02 --:--:-- 0:00:02 463k
100 1321k 100 1321k 0 0 1054k 0 0:00:01 0:00:01 --:--:-- 1054k
install for i386
* installing *source* package 'CONFESS' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'stats::BIC' by 'flowMerge::BIC' when loading 'CONFESS'
** help
*** installing help indices
converting help for package 'CONFESS'
finding HTML links ... done
BGcorrectFluo html
BatchFluo html
CVsampler html
DDHFfit html
DDHFinput html
FluoInspection html
FluoSelection_byRun html
Fluo_CV_modeling html
Fluo_CV_prep html
Fluo_adjustment html
Fluo_inspection html
Fluo_modeling html
Fluo_ordering html
GAPanalysis html
GrubbsOutliers html
LocationMatrix html
Results html
SpotStats html
SpotbyStrLines html
addKpredictions html
adjustFluo html
aveDiff html
boxFluo html
boxcoxMatrix html
boxcoxMatrixEst html
caseof0s html
caseof1R0G html
caseof1R1G html
caseof1R2G html
caseof2R1G html
caseof2R2G html
caseof2Rs0G html
clu html
cluster2outlier html
contrastFluo html
cpPELT html
cpoints html
createFluo html
cutpointsEstimator html
ddhft.np.2 html
defineLocClusters html
denoisefun html
denoiser html
despecklefun html
diagnoseResiduals html
distfromcenter html
doTransform html
estimate.new.pseudotimes html
estimatePath html
estimates.2 html
estimates html
extractBFArea html
failurecase html
fclust html
files html
filled.contour3 html
findPattern html
fixPath html
flowclust_step1 html
flowclust_step2 html
forceBF html
function.from.vector html
getCoordinates_stats html
getCsFAIL html
getFluo html
getFluo_byRun html
getSpot html
giveWarning html
grouplines html
grubbs html
highlight.cols html
invTransform html
isotone html
joinAreas html
listSorter html
lmFluo html
mean_signal html
measureB html
measureF html
multiplot html
myt html
orderFluo html
path.initiator html
pathEstimator html
pathUpdater html
plotImages html
plot_clusgap html
predict.kmeans html
processImg html
project html
readChaImg html
readFiles html
readOriImg html
reestimate.pseudos.byCV html
refineMixes html
revDDHFinput html
signal.from.matrix html
significantSignal html
simcells html
sortCentroids html
spot.simulator html
spotCenter html
spotCoords html
spotEstimator html
step1 html
step2.1 html
step2 html
step3.1 html
step3 html
step4 html
steps2_4 html
straightColLines html
straightRowLines html
subsetAnalysis html
summarizeAdjFluo html
transformFluo html
trigofun html
unnormalizeC01 html
updateCentroids html
updateCentroidsPaths html
which.min.diff html
zoomInBF html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'stats::BIC' by 'flowMerge::BIC' when loading 'CONFESS'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'stats::BIC' by 'flowMerge::BIC' when loading 'CONFESS'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CONFESS' ...
** testing if installed package can be loaded
Warning: replacing previous import 'stats::BIC' by 'flowMerge::BIC' when loading 'CONFESS'
* MD5 sums
packaged installation of 'CONFESS' as CONFESS_1.22.0.zip
* DONE (CONFESS)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'CONFESS' successfully unpacked and MD5 sums checked