Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:27 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for DEqMS on tokay2


To the developers/maintainers of the DEqMS package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DEqMS.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 489/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DEqMS 1.12.1  (landing page)
Yafeng Zhu
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/DEqMS
git_branch: RELEASE_3_14
git_last_commit: fa586ec
git_last_commit_date: 2022-01-18 05:39:00 -0400 (Tue, 18 Jan 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: DEqMS
Version: 1.12.1
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/DEqMS_1.12.1.tar.gz && rm -rf DEqMS.buildbin-libdir && mkdir DEqMS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEqMS.buildbin-libdir DEqMS_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL DEqMS_1.12.1.zip && rm DEqMS_1.12.1.tar.gz DEqMS_1.12.1.zip
StartedAt: 2022-04-12 04:44:07 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 04:44:51 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 43.2 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/DEqMS_1.12.1.tar.gz && rm -rf DEqMS.buildbin-libdir && mkdir DEqMS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEqMS.buildbin-libdir DEqMS_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL DEqMS_1.12.1.zip && rm DEqMS_1.12.1.tar.gz DEqMS_1.12.1.zip
###
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##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  108k  100  108k    0     0   213k      0 --:--:-- --:--:-- --:--:--  213k
100  108k  100  108k    0     0   213k      0 --:--:-- --:--:-- --:--:--  213k

install for i386

* installing *source* package 'DEqMS' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'DEqMS'
    finding HTML links ... done
    Residualplot                            html  
    VarianceBoxplot                         html  
    VarianceScatterplot                     html  
    equalMedianNormalization                html  
    farmsSummary                            html  
    medianSummary                           html  
    medianSweeping                          html  
    medpolishSummary                        html  
    outputResult                            html  
    peptideProfilePlot                      html  
    spectraCounteBayes                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DEqMS' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DEqMS' as DEqMS_1.12.1.zip
* DONE (DEqMS)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'DEqMS' successfully unpacked and MD5 sums checked