Back to Multiple platform build/check report for BioC 3.14
ABCDEFG[H]IJKLMNOPQRSTUVWXYZ

This page was generated on 2022-04-13 12:06:42 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for HIPPO on tokay2


To the developers/maintainers of the HIPPO package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HIPPO.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 876/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HIPPO 1.6.0  (landing page)
Tae Kim
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/HIPPO
git_branch: RELEASE_3_14
git_last_commit: c9e2f06
git_last_commit_date: 2021-10-26 12:58:22 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: HIPPO
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/HIPPO_1.6.0.tar.gz && rm -rf HIPPO.buildbin-libdir && mkdir HIPPO.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HIPPO.buildbin-libdir HIPPO_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL HIPPO_1.6.0.zip && rm HIPPO_1.6.0.tar.gz HIPPO_1.6.0.zip
StartedAt: 2022-04-12 05:43:00 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 05:43:55 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 55.4 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/HIPPO_1.6.0.tar.gz && rm -rf HIPPO.buildbin-libdir && mkdir HIPPO.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HIPPO.buildbin-libdir HIPPO_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL HIPPO_1.6.0.zip && rm HIPPO_1.6.0.tar.gz HIPPO_1.6.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 18  467k   18 86211    0     0   440k      0  0:00:01 --:--:--  0:00:01  440k
100  467k  100  467k    0     0   889k      0 --:--:-- --:--:-- --:--:--  889k

install for i386

* installing *source* package 'HIPPO' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'HIPPO'
    finding HTML links ... done
    ensg_hgnc                               html  
    get_data_from_sce                       html  
    get_hippo                               html  
    get_hippo_diffexp                       html  
    hippo                                   html  
    hippo_diagnostic_plot                   html  
    hippo_diffexp                           html  
    hippo_dimension_reduction               html  
    hippo_feature_heatmap                   html  
    hippo_pca_plot                          html  
    hippo_tsne_plot                         html  
    hippo_umap_plot                         html  
    nb_prob_zero                            html  
    pipe                                    html  
    pois_prob_zero                          html  
    preprocess_heterogeneous                html  
    preprocess_homogeneous                  html  
    toydata                                 html  
    zero_proportion_plot                    html  
    zinb_prob_zero                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'HIPPO' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'HIPPO' as HIPPO_1.6.0.zip
* DONE (HIPPO)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'HIPPO' successfully unpacked and MD5 sums checked