Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:05:28 -0400 (Wed, 13 Apr 2022).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the HilbertCurve package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HilbertCurve.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 871/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HilbertCurve 1.24.0 (landing page) Zuguang Gu
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: HilbertCurve |
Version: 1.24.0 |
Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:HilbertCurve.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings HilbertCurve_1.24.0.tar.gz |
StartedAt: 2022-04-12 07:47:15 -0400 (Tue, 12 Apr 2022) |
EndedAt: 2022-04-12 07:49:03 -0400 (Tue, 12 Apr 2022) |
EllapsedTime: 108.6 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HilbertCurve.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:HilbertCurve.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings HilbertCurve_1.24.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.14-bioc/meat/HilbertCurve.Rcheck’ * using R version 4.1.3 (2022-03-10) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘HilbertCurve/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HilbertCurve’ version ‘1.24.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HilbertCurve’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed hc_layer-HilbertCurve-method 9.240 0.056 9.296 hc_layer-GenomicHilbertCurve-method 7.714 0.220 7.934 GenomicHilbertCurve 6.294 0.400 7.225 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘test-all.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: OK
HilbertCurve.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL HilbertCurve ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’ * installing *source* package ‘HilbertCurve’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ‘HilbertCurve.Rmd’ using ‘UTF-8’ ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HilbertCurve)
HilbertCurve.Rcheck/tests/test-all.Rout
R version 4.1.3 (2022-03-10) -- "One Push-Up" Copyright (C) 2022 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > suppressWarnings(suppressPackageStartupMessages(library(HilbertCurve))) > > test_check("HilbertCurve") [ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ] > > proc.time() user system elapsed 3.186 0.337 3.510
HilbertCurve.Rcheck/HilbertCurve-Ex.timings
name | user | system | elapsed | |
GenomicHilbertCurve-class | 0 | 0 | 0 | |
GenomicHilbertCurve | 6.294 | 0.400 | 7.225 | |
HilbertCurve-class | 0 | 0 | 0 | |
HilbertCurve | 0.473 | 0.020 | 0.492 | |
default_overlay | 0 | 0 | 0 | |
hc_centered_text-HilbertCurve-method | 0.100 | 0.000 | 0.101 | |
hc_layer-GenomicHilbertCurve-method | 7.714 | 0.220 | 7.934 | |
hc_layer-HilbertCurve-method | 9.240 | 0.056 | 9.296 | |
hc_layer-dispatch | 0 | 0 | 0 | |
hc_level-HilbertCurve-method | 0.025 | 0.000 | 0.025 | |
hc_map-GenomicHilbertCurve-method | 2.844 | 0.016 | 2.860 | |
hc_normal_points-HilbertCurve-method | 0 | 0 | 0 | |
hc_offset-HilbertCurve-method | 0.009 | 0.000 | 0.009 | |
hc_png-HilbertCurve-method | 2.902 | 0.016 | 2.918 | |
hc_points-GenomicHilbertCurve-method | 0.330 | 0.000 | 0.331 | |
hc_points-HilbertCurve-method | 0.467 | 0.004 | 0.471 | |
hc_points-dispatch | 0 | 0 | 0 | |
hc_polygon-GenomicHilbertCurve-method | 0.367 | 0.004 | 0.371 | |
hc_polygon-HilbertCurve-method | 0.094 | 0.000 | 0.093 | |
hc_polygon-dispatch | 0 | 0 | 0 | |
hc_rect-GenomicHilbertCurve-method | 0.277 | 0.000 | 0.277 | |
hc_rect-HilbertCurve-method | 0.068 | 0.000 | 0.068 | |
hc_rect-dispatch | 0 | 0 | 0 | |
hc_segmented_points-HilbertCurve-method | 0 | 0 | 0 | |
hc_segments-GenomicHilbertCurve-method | 0.774 | 0.008 | 0.782 | |
hc_segments-HilbertCurve-method | 0.091 | 0.000 | 0.092 | |
hc_segments-dispatch | 0.000 | 0.000 | 0.001 | |
hc_text-GenomicHilbertCurve-method | 0.233 | 0.000 | 0.233 | |
hc_text-HilbertCurve-method | 0.054 | 0.004 | 0.058 | |
hc_text-dispatch | 0 | 0 | 0 | |
is_white | 0 | 0 | 0 | |
show-HilbertCurve-method | 0.006 | 0.000 | 0.006 | |
unzoom-HilbertCurve-method | 0.005 | 0.000 | 0.005 | |
zoom-HilbertCurve-method | 0.005 | 0.000 | 0.005 | |