| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:45 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the InterCellar package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/InterCellar.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 944/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| InterCellar 2.0.0 (landing page) Marta Interlandi
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: InterCellar |
| Version: 2.0.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/InterCellar_2.0.0.tar.gz && rm -rf InterCellar.buildbin-libdir && mkdir InterCellar.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=InterCellar.buildbin-libdir InterCellar_2.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL InterCellar_2.0.0.zip && rm InterCellar_2.0.0.tar.gz InterCellar_2.0.0.zip |
| StartedAt: 2022-04-12 07:25:18 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:26:48 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 89.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/InterCellar_2.0.0.tar.gz && rm -rf InterCellar.buildbin-libdir && mkdir InterCellar.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=InterCellar.buildbin-libdir InterCellar_2.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL InterCellar_2.0.0.zip && rm InterCellar_2.0.0.tar.gz InterCellar_2.0.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
7 2382k 7 171k 0 0 640k 0 0:00:03 --:--:-- 0:00:03 641k
73 2382k 73 1743k 0 0 1373k 0 0:00:01 0:00:01 --:--:-- 1373k
100 2382k 100 2382k 0 0 1354k 0 0:00:01 0:00:01 --:--:-- 1355k
install for i386
* installing *source* package 'InterCellar' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'InterCellar'
finding HTML links ... done
annotateGO html
annotatePathways html
buildPairsbyFunctionMatrix html
checkLL_RR html
circlePlot html
combineAnnotations html
createBarPlot1_ggplot html
createBarPlot2_CV html
createBarPlot2_ggplot html
createBarPlot_CV html
createNetwork html
dendroIntPairModules html
elbowPoint html
ensemblLink html
getBack2BackBarplot html
getBarplotDF html
getBarplotDF2 html
getClusterA_Names html
getClusterColors html
getClusterNames html
getClusterNetwork html
getClusterSize html
getDistinctCouplets html
getDotPlot_selInt html
getGObiomaRt html
getGeneTable html
getHitsf html
getIntFlow html
getNtermsBYdb html
getNumLR html
getPieChart html
getRadar_df html
getRankedTerms html
getSignif_table html
getSignificantFunctions html
getSignificantFunctions_multiCond html
getSunburst html
getUMAPipModules html
getUniqueDotplot html
getUniqueIntpairs_byCond html
goLink html
input.data html
read.CPDBv2 html
read.SCsignalR html
read.cellchat html
read.customInput html
read.icellnet html
run_app html
subsetAnnot_multiCond html
subsetFuncMatBYFlow html
swap.RLint html
uniprotLink html
updateInputLR html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'InterCellar' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'InterCellar' as InterCellar_2.0.0.zip
* DONE (InterCellar)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'InterCellar' successfully unpacked and MD5 sums checked