| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:46 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the KEGGgraph package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/KEGGgraph.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 979/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| KEGGgraph 1.54.0 (landing page) Jitao David Zhang
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: KEGGgraph |
| Version: 1.54.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/KEGGgraph_1.54.0.tar.gz && rm -rf KEGGgraph.buildbin-libdir && mkdir KEGGgraph.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=KEGGgraph.buildbin-libdir KEGGgraph_1.54.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL KEGGgraph_1.54.0.zip && rm KEGGgraph_1.54.0.tar.gz KEGGgraph_1.54.0.zip |
| StartedAt: 2022-04-12 04:36:23 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 04:38:31 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 127.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/KEGGgraph_1.54.0.tar.gz && rm -rf KEGGgraph.buildbin-libdir && mkdir KEGGgraph.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=KEGGgraph.buildbin-libdir KEGGgraph_1.54.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL KEGGgraph_1.54.0.zip && rm KEGGgraph_1.54.0.tar.gz KEGGgraph_1.54.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
63 929k 63 590k 0 0 632k 0 0:00:01 --:--:-- 0:00:01 632k
100 929k 100 929k 0 0 756k 0 0:00:01 0:00:01 --:--:-- 757k
install for i386
* installing *source* package 'KEGGgraph' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'KEGGgraph'
finding HTML links ... done
KEGGEdge-class html
KEGGEdgeSubType-class html
KEGGEdgeSubtype html
KEGGEdgeType html
KEGGGraphics-class html
KEGGGroup-class html
KEGGNode-class html
KEGGNodeType html
KEGGPATHID2NAME html
KEGGPathway-class html
KEGGPathwayInfo-class html
KEGGReaction-class html
KEGGpathway2Graph html
KEGGpathway2reactionGraph html
expandKEGGNode html
expandKEGGPathway html
getDisplayName-methods html
getEntryID-methods html
getKEGGID-methods html
getKEGGgeneLink-methods html
getKEGGnodeData html
getKGMLurl html
getName-methods html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/KEGGgraph.buildbin-libdir/00LOCK-KEGGgraph/00new/KEGGgraph/help/getName+2CKEGGEdgeSubtype-method.html
getNamedElement html
getPathwayInfo-methods html
getReactions-methods html
getRgraphvizEdgeNames html
getSubtype-methods html
getTitle-methods html
getType-methods html
getValue-methods html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/KEGGgraph.buildbin-libdir/00LOCK-KEGGgraph/00new/KEGGgraph/help/getValue+2CKEGGEdgeSubtype-method.html
graphDensity html
isHomoList html
kgmlFileName2PathwayName html
mergeGraphs html
mergeKEGGgraphs html
neighborhood html
parseEntry html
parseGraphics html
parseKGML html
parseKGML2DataFrame html
parseKGML2Graph html
parseKGMLexpandMaps html
parsePathwayInfo html
parseReaction html
parseRelation html
parseSubType html
plotKEGGgraph html
pvalue2asterisk html
queryKEGGsubgraph html
randomSubGraph html
splitKEGGgroup html
subGraphByNodeType html
subKEGGgraph html
subtypeDisplay-methods html
top html
translateKEGGID2GeneID html
translateKEGGgraph html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'KEGGgraph' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'KEGGgraph' as KEGGgraph_1.54.0.zip
* DONE (KEGGgraph)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'KEGGgraph' successfully unpacked and MD5 sums checked