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This page was generated on 2022-04-13 12:06:47 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for KnowSeq on tokay2


To the developers/maintainers of the KnowSeq package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/KnowSeq.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 986/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
KnowSeq 1.8.1  (landing page)
Daniel Castillo-Secilla
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/KnowSeq
git_branch: RELEASE_3_14
git_last_commit: 9e61007
git_last_commit_date: 2022-04-08 10:50:06 -0400 (Fri, 08 Apr 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: KnowSeq
Version: 1.8.1
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/KnowSeq_1.8.1.tar.gz && rm -rf KnowSeq.buildbin-libdir && mkdir KnowSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=KnowSeq.buildbin-libdir KnowSeq_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL KnowSeq_1.8.1.zip && rm KnowSeq_1.8.1.tar.gz KnowSeq_1.8.1.zip
StartedAt: 2022-04-12 07:31:17 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 07:33:00 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 102.3 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/KnowSeq_1.8.1.tar.gz && rm -rf KnowSeq.buildbin-libdir && mkdir KnowSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=KnowSeq.buildbin-libdir KnowSeq_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL KnowSeq_1.8.1.zip && rm KnowSeq_1.8.1.tar.gz KnowSeq_1.8.1.zip
###
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##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 10 4196k   10  441k    0     0   775k      0  0:00:05 --:--:--  0:00:05  775k
 44 4196k   44 1887k    0     0  1201k      0  0:00:03  0:00:01  0:00:02 1201k
100 4196k  100 4196k    0     0  1678k      0  0:00:02  0:00:02 --:--:-- 1679k

install for i386

* installing *source* package 'KnowSeq' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'KnowSeq'
    finding HTML links ... done
    DEGsEvidences                           html  
    DEGsExtraction                          html  
    DEGsToDiseases                          html  
    DEGsToPathways                          html  
    RNAseqQA                                html  
    batchEffectRemoval                      html  
    calculateGeneExpressionValues           html  
    countsToMatrix                          html  
    dataPlot                                html  
    downloadPublicSeries                    html  
    featureSelection                        html  
    fileMove                                html  
    gdcClientDownload                       html  
    geneOntologyEnrichment                  html  
    getGenesAnnotation                      html  
    hisatAlignment                          html  
    knn_test                                html  
    knn_trn                                 html  
    knowseqReport                           html  
    plotConfMatrix                          html  
    rawAlignment                            html  
    rf_test                                 html  
    rf_trn                                  html  
    sraToFastq                              html  
    svm_test                                html  
    svm_trn                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'KnowSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'KnowSeq' as KnowSeq_1.8.1.zip
* DONE (KnowSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'KnowSeq' successfully unpacked and MD5 sums checked