Sunny Jones
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/MOMA |
| git_branch: RELEASE_3_14 |
| git_last_commit: 2d64f18 |
| git_last_commit_date: 2021-10-26 12:59:21 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:55 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the MOMA package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MOMA.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1193/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MOMA 1.6.0 (landing page) Sunny Jones
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: MOMA |
| Version: 1.6.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/MOMA_1.6.0.tar.gz && rm -rf MOMA.buildbin-libdir && mkdir MOMA.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MOMA.buildbin-libdir MOMA_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL MOMA_1.6.0.zip && rm MOMA_1.6.0.tar.gz MOMA_1.6.0.zip |
| StartedAt: 2022-04-12 06:28:33 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:30:59 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 146.2 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/MOMA_1.6.0.tar.gz && rm -rf MOMA.buildbin-libdir && mkdir MOMA.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MOMA.buildbin-libdir MOMA_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL MOMA_1.6.0.zip && rm MOMA_1.6.0.tar.gz MOMA_1.6.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
1 4071k 1 51087 0 0 261k 0 0:00:15 --:--:-- 0:00:15 261k
23 4071k 23 937k 0 0 789k 0 0:00:05 0:00:01 0:00:04 790k
52 4071k 52 2147k 0 0 984k 0 0:00:04 0:00:02 0:00:02 984k
98 4071k 98 4015k 0 0 1262k 0 0:00:03 0:00:03 --:--:-- 1262k
100 4071k 100 4071k 0 0 1266k 0 0:00:03 0:00:03 --:--:-- 1265k
install for i386
* installing *source* package 'MOMA' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'MOMA'
finding HTML links ... done
Moma-class html
areaEnrich html
associateEvents html
checkGeneMap html
checkList html
checkMAE html
checkPathways html
clusterRange html
clusterReliability html
cnvScoreStouffer html
conditionalModel html
conditionalP html
empiricalP html
example.gbm.mae html
fitCurvePercent html
gbm.pathways html
gene.map html
genomicPlotSmall html
getCoverage html
getDataFrame html
getDiggitEmpiricalQvalues html
getEmpiricalQvals html
getPvalsMatrix html
getSubtypeEventTables html
integrateFunction html
integrateTZ html
makeCoverageDf html
makeSaturationPlots html
mapEntrez html
mapHugo html
mapScoresCnvBand html
mergeData html
mergeDataBySubtype html
mergeGenomicSaturation html
mergeLists html
momaConstructor html
mutSig html
oncoprintPlot html
pathwayDiggitIntersect html
plotEvents html
rea html
reaNULL html
sREA html
sampleNameFilter html
sampleOverlap html
sigInteractorsDIGGIT html
stoufferIntegrate html
stoufferIntegrateDiggit html
subsetListInteractions html
validDiggitInteractions html
viperGetSigTFS html
viperGetTFScores html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'MOMA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MOMA' as MOMA_1.6.0.zip
* DONE (MOMA)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'MOMA' successfully unpacked and MD5 sums checked