Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:07:11 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for REBET on tokay2


To the developers/maintainers of the REBET package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/REBET.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1561/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
REBET 1.12.0  (landing page)
Bill Wheeler
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/REBET
git_branch: RELEASE_3_14
git_last_commit: 3d8fc42
git_last_commit_date: 2021-10-26 12:46:24 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: REBET
Version: 1.12.0
Command: rm -rf REBET.buildbin-libdir && mkdir REBET.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=REBET.buildbin-libdir REBET_1.12.0.tar.gz
StartedAt: 2022-04-13 06:56:30 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 06:56:45 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 14.6 seconds
RetCode: 0
Status:   OK  
PackageFile: REBET_1.12.0.zip
PackageFileSize: 278.2 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf REBET.buildbin-libdir && mkdir REBET.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=REBET.buildbin-libdir REBET_1.12.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'REBET' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c source.c -o source.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o REBET.dll tmp.def source.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/REBET.buildbin-libdir/00LOCK-REBET/00new/REBET/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'REBET'
    finding HTML links ... done
    data                                    html  
    package                                 html  
    rebet                                   html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/REBET.buildbin-libdir/00LOCK-REBET/00new/REBET/help/rebet.html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'REBET' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c source.c -o source.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o REBET.dll tmp.def source.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/REBET.buildbin-libdir/REBET/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'REBET' as REBET_1.12.0.zip
* DONE (REBET)