Jitao David Zhang
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/RpsiXML |
| git_branch: RELEASE_3_14 |
| git_last_commit: cc895e5 |
| git_last_commit_date: 2021-10-26 11:52:47 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:15 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the RpsiXML package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RpsiXML.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1651/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| RpsiXML 2.36.0 (landing page) Jitao David Zhang
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: RpsiXML |
| Version: 2.36.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RpsiXML_2.36.0.tar.gz && rm -rf RpsiXML.buildbin-libdir && mkdir RpsiXML.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RpsiXML.buildbin-libdir RpsiXML_2.36.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RpsiXML_2.36.0.zip && rm RpsiXML_2.36.0.tar.gz RpsiXML_2.36.0.zip |
| StartedAt: 2022-04-12 05:50:11 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:52:09 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 118.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RpsiXML_2.36.0.tar.gz && rm -rf RpsiXML.buildbin-libdir && mkdir RpsiXML.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RpsiXML.buildbin-libdir RpsiXML_2.36.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RpsiXML_2.36.0.zip && rm RpsiXML_2.36.0.tar.gz RpsiXML_2.36.0.zip
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install for i386
* installing *source* package 'RpsiXML' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'RpsiXML'
finding HTML links ... done
BIOGRID.PSIMI25 html
availableXrefs-methods html
availableXrefs html
bait html
buildPCHypergraph html
complexName html
complexes html
eListHandler html
getAbstractByPMID html
graphSpeciesConverter html
interactionType html
interactions html
interactorInfo-methods html
interactorInfo html
interactors html
list2Matrix html
null2na html
numInteractions-methods html
parsePsimi25Interaction html
psimi25Attribute-class html
psimi25Complex-class html
psimi25ComplexEntry-class html
psimi25Experiment-class html
psimi25Graph-class html
psimi25Hypergraph-class html
psimi25Hypergraph2GraphNEL html
psimi25Interaction-class html
psimi25InteractionEntry-class html
psimi25Interactor-class html
psimi25Source-class html
psimi25XML2Graph html
separateXMLDataByExpt html
sourceId-methods html
taxId-methods html
translateID-methods html
translateID html
uniprot-methods html
uniprot html
validatePSIMI25 html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'RpsiXML' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RpsiXML' as RpsiXML_2.36.0.zip
* DONE (RpsiXML)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'RpsiXML' successfully unpacked and MD5 sums checked