| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:29 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the TimiRGeN package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TimiRGeN.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1960/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| TimiRGeN 1.4.0 (landing page) Krutik Patel
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
| Package: TimiRGeN |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TimiRGeN_1.4.0.tar.gz && rm -rf TimiRGeN.buildbin-libdir && mkdir TimiRGeN.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TimiRGeN.buildbin-libdir TimiRGeN_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TimiRGeN_1.4.0.zip && rm TimiRGeN_1.4.0.tar.gz TimiRGeN_1.4.0.zip |
| StartedAt: 2022-04-12 07:06:18 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:10:01 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 222.3 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TimiRGeN_1.4.0.tar.gz && rm -rf TimiRGeN.buildbin-libdir && mkdir TimiRGeN.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TimiRGeN.buildbin-libdir TimiRGeN_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TimiRGeN_1.4.0.zip && rm TimiRGeN_1.4.0.tar.gz TimiRGeN_1.4.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
9 3063k 9 299k 0 0 795k 0 0:00:03 --:--:-- 0:00:03 795k
49 3063k 49 1514k 0 0 1082k 0 0:00:02 0:00:01 0:00:01 1082k
98 3063k 98 3032k 0 0 1262k 0 0:00:02 0:00:02 --:--:-- 1262k
100 3063k 100 3063k 0 0 1274k 0 0:00:02 0:00:02 --:--:-- 1274k
install for i386
* installing *source* package 'TimiRGeN' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
Warning in load(zfile, envir = tmp_env) :
strings not representable in native encoding will be translated to UTF-8
Warning in load(zfile, envir = tmp_env) :
strings not representable in native encoding will be translated to UTF-8
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'TimiRGeN'
finding HTML links ... done
UUO_data html
addIds html
addPrefix html
clusterCheck html
clusterList html
combineGenes html
createClusters html
createClusters2 html
cytoMake html
dataMiningMatrix html
diffExpressRes html
dloadGmt html
dloadMirdb html
dloadMirtarbase html
dloadTargetscan html
eNames html
e_list_mouse html
enrichWiki html
genesList html
getIdsMir html
getIdsMrna html
gmtEnsembl html
hs_mRNA html
hs_miR html
hs_probes html
linearRegr html
long_data html
makeDynamic html
makeMapp html
makeNet html
matrixFilter html
miRTarBase html
mirMrnaInt html
mm_mRNA html
mm_miR html
multiReg html
quickBar html
quickCrossCorr html
quickDMap html
quickDendro html
quickFuzz html
quickHClust html
quickMap html
quickNet html
quickPathwayTC html
quickReg html
quickTC html
quickTCPred html
reduceWiki html
returnCluster html
savePlots html
significantVals html
startObject html
turnPercent html
w_list_mouse html
wikiList html
wikiMatrix html
wikiMrna html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'TimiRGeN' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TimiRGeN' as TimiRGeN_1.4.0.zip
* DONE (TimiRGeN)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'TimiRGeN' successfully unpacked and MD5 sums checked