Aurelien Brionne
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/ViSEAGO |
| git_branch: RELEASE_3_14 |
| git_last_commit: c5fd4b9 |
| git_last_commit_date: 2021-10-26 12:52:59 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:33 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the ViSEAGO package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ViSEAGO.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 2052/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ViSEAGO 1.8.0 (landing page) Aurelien Brionne
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: ViSEAGO |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ViSEAGO_1.8.0.tar.gz && rm -rf ViSEAGO.buildbin-libdir && mkdir ViSEAGO.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ViSEAGO.buildbin-libdir ViSEAGO_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ViSEAGO_1.8.0.zip && rm ViSEAGO_1.8.0.tar.gz ViSEAGO_1.8.0.zip |
| StartedAt: 2022-04-12 06:28:03 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:31:00 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 177.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ViSEAGO_1.8.0.tar.gz && rm -rf ViSEAGO.buildbin-libdir && mkdir ViSEAGO.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ViSEAGO.buildbin-libdir ViSEAGO_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ViSEAGO_1.8.0.zip && rm ViSEAGO_1.8.0.tar.gz ViSEAGO_1.8.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
5 6608k 5 341k 0 0 1121k 0 0:00:05 --:--:-- 0:00:05 1122k
58 6608k 58 3875k 0 0 2967k 0 0:00:02 0:00:01 0:00:01 2967k
100 6608k 100 6608k 0 0 3407k 0 0:00:01 0:00:01 --:--:-- 3406k
install for i386
* installing *source* package 'ViSEAGO' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'data.table::set' by 'dendextend::set' when loading 'ViSEAGO'
** help
*** installing help indices
converting help for package 'ViSEAGO'
finding HTML links ... done
Bioconductor2GO html
Custom2GO html
Ensembl2GO html
EntrezGene2GO html
EntrezGene_orthologs html
GO_SS-class html
GO_clusters-class html
GOclusters_heatmap-methods html
GOcount-methods html
GOterms_heatmap-methods html
MDSplot-methods html
Uniprot2GO html
Upset-methods html
ViSEAGO html
annotate-methods html
available_organisms-methods html
build_GO_SS-methods html
clusters_cor-methods html
compare_clusters-methods html
compute_SS_distances-methods html
create_topGOdata-methods html
enrich_GO_terms-class html
fgsea-class html
gene2GO-class html
genomic_ressource-class html
merge_enrich_terms-methods html
myGOs html
overLapper html
finding level-2 HTML links ... done
pkgdiagram html
runfgsea-methods html
show_heatmap-methods html
show_table-methods html
taxonomy html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'data.table::set' by 'dendextend::set' when loading 'ViSEAGO'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'data.table::set' by 'dendextend::set' when loading 'ViSEAGO'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ViSEAGO' ...
** testing if installed package can be loaded
Warning: replacing previous import 'data.table::set' by 'dendextend::set' when loading 'ViSEAGO'
* MD5 sums
packaged installation of 'ViSEAGO' as ViSEAGO_1.8.0.zip
* DONE (ViSEAGO)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'ViSEAGO' successfully unpacked and MD5 sums checked