Jacques Serizay
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/VplotR |
| git_branch: RELEASE_3_14 |
| git_last_commit: 2aee3df |
| git_last_commit_date: 2021-10-26 13:01:54 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:33 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the VplotR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/VplotR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 2054/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| VplotR 1.4.0 (landing page) Jacques Serizay
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: VplotR |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/VplotR_1.4.0.tar.gz && rm -rf VplotR.buildbin-libdir && mkdir VplotR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=VplotR.buildbin-libdir VplotR_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL VplotR_1.4.0.zip && rm VplotR_1.4.0.tar.gz VplotR_1.4.0.zip |
| StartedAt: 2022-04-12 05:32:54 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:33:47 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 53.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/VplotR_1.4.0.tar.gz && rm -rf VplotR.buildbin-libdir && mkdir VplotR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=VplotR.buildbin-libdir VplotR_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL VplotR_1.4.0.zip && rm VplotR_1.4.0.tar.gz VplotR_1.4.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
7 3017k 7 217k 0 0 821k 0 0:00:03 --:--:-- 0:00:03 820k
58 3017k 58 1754k 0 0 1425k 0 0:00:02 0:00:01 0:00:01 1425k
100 3017k 100 3017k 0 0 1526k 0 0:00:01 0:00:01 --:--:-- 1526k
install for i386
* installing *source* package 'VplotR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'VplotR'
finding HTML links ... done
ABF1_sacCer3 html
ATAC_ce11_Serizay2020 html
CTCF_hg38 html
MNase_sacCer3_Henikoff2011 html
MNase_sacCer3_Henikoff2011_subset html
REB1_sacCer3 html
alignToTSS html
bam_test html
ce11_all_REs html
ce11_proms html
computeNucleosomeEnrichmentOverBackground
html
computeVmat html
deconvolveBidirectionalPromoters html
getCuts html
getFragmentsDistribution html
importPEBamFiles html
normalizeVmat html
nucleosomeEnrichment.GRanges html
nucleosomeEnrichment html
nucleosomeEnrichment.Vmat html
plotFootprint html
plotProfile html
plotVmat.GRanges html
plotVmat html
plotVmat.Vmat html
plotVmat.VmatList html
plotVmat.default html
plotVmat.list html
sampleGRanges.GRanges html
sampleGRanges html
shiftATACGranges html
shuffleVmat html
theme_ggplot2 html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'VplotR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'VplotR' as VplotR_1.4.0.zip
* DONE (VplotR)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'VplotR' successfully unpacked and MD5 sums checked