Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:10 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for annotationTools on tokay2


To the developers/maintainers of the annotationTools package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/annotationTools.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 65/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
annotationTools 1.68.0  (landing page)
Alexandre Kuhn
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/annotationTools
git_branch: RELEASE_3_14
git_last_commit: 387174f
git_last_commit_date: 2021-10-26 11:50:55 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: annotationTools
Version: 1.68.0
Command: rm -rf annotationTools.buildbin-libdir && mkdir annotationTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annotationTools.buildbin-libdir annotationTools_1.68.0.tar.gz
StartedAt: 2022-04-13 05:36:41 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 05:36:54 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 12.8 seconds
RetCode: 0
Status:   OK  
PackageFile: annotationTools_1.68.0.zip
PackageFileSize: 427 KiB

Command output

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###
### Running command:
###
###   rm -rf annotationTools.buildbin-libdir && mkdir annotationTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annotationTools.buildbin-libdir annotationTools_1.68.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'annotationTools' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'annotationTools'
    finding HTML links ... done
    HG-U133_Plus_2_annot_part               html  
    HG-U133_Plus_2_ortholog_part            html  
    Mouse430_2_annot_part                   html  
    annot_HGU133A                           html  
    compactList                             html  
    gene_orthologs_part                     html  
    getANNOTATION                           html  
    getGENEID                               html  
    getGENEONTOLOGY                         html  
    getGENESYMBOL                           html  
    getGENETITLE                            html  
    getHOMOLOG                              html  
    getMULTIANNOTATION                      html  
    getOrthologousProbesets                 html  
    getPROBESET                             html  
    homologene_part                         html  
    listToCharacterVector                   html  
    ortho                                   html  
    ps2ps                                   html  
    table_human                             html  
    table_mouse                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'annotationTools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'annotationTools' as annotationTools_1.68.0.zip
* DONE (annotationTools)