Beth Signal
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/branchpointer |
| git_branch: RELEASE_3_14 |
| git_last_commit: 09d2e40 |
| git_last_commit_date: 2021-10-26 12:33:49 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:16 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the branchpointer package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/branchpointer.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 213/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| branchpointer 1.20.0 (landing page) Beth Signal
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: branchpointer |
| Version: 1.20.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/branchpointer_1.20.0.tar.gz && rm -rf branchpointer.buildbin-libdir && mkdir branchpointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=branchpointer.buildbin-libdir branchpointer_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL branchpointer_1.20.0.zip && rm branchpointer_1.20.0.tar.gz branchpointer_1.20.0.zip |
| StartedAt: 2022-04-12 07:25:51 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:27:43 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 112.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/branchpointer_1.20.0.tar.gz && rm -rf branchpointer.buildbin-libdir && mkdir branchpointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=branchpointer.buildbin-libdir branchpointer_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL branchpointer_1.20.0.zip && rm branchpointer_1.20.0.tar.gz branchpointer_1.20.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
26 4716k 26 1240k 0 0 1193k 0 0:00:03 0:00:01 0:00:02 1193k
73 4716k 73 3451k 0 0 1689k 0 0:00:02 0:00:02 --:--:-- 1690k
100 4716k 100 4716k 0 0 1887k 0 0:00:02 0:00:02 --:--:-- 1887k
install for i386
* installing *source* package 'branchpointer' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'branchpointer'
finding HTML links ... done
exonsToIntrons html
getBranchpointSequence html
getCanonical3SS html
getExonDists html
getPPT html
getQueryLoc html
gtfToExons html
makeBranchpointWindowForExons html
makeBranchpointWindowForSNP html
plotBranchpointWindow html
plotStructure html
predictBranchpoints html
predictionsToSummary html
readQueryFile html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'branchpointer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'branchpointer' as branchpointer_1.20.0.zip
* DONE (branchpointer)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'branchpointer' successfully unpacked and MD5 sums checked