Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:05:09 -0400 (Wed, 13 Apr 2022).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the cancerclass package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/cancerclass.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 241/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
cancerclass 1.38.0 (landing page) Daniel Kosztyla
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
Package: cancerclass |
Version: 1.38.0 |
Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL cancerclass |
StartedAt: 2022-04-12 03:14:54 -0400 (Tue, 12 Apr 2022) |
EndedAt: 2022-04-12 03:15:00 -0400 (Tue, 12 Apr 2022) |
EllapsedTime: 5.9 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL cancerclass ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’ * installing *source* package ‘cancerclass’ ... ** using staged installation ** libs gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c copa.c -o copa.o gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c cor.c -o cor.o gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c fc.c -o fc.o gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c help.c -o help.o help.c: In function ‘welch_df’: help.c:263:19: warning: variable ‘mean2’ set but not used [-Wunused-but-set-variable] 263 | double mean1, mean2, var1, var2 = 0.0; | ^~~~~ help.c:263:12: warning: variable ‘mean1’ set but not used [-Wunused-but-set-variable] 263 | double mean1, mean2, var1, var2 = 0.0; | ^~~~~ help.c: In function ‘bsortdesc’: help.c:344:13: warning: variable ‘anzahl’ set but not used [-Wunused-but-set-variable] 344 | int i,k,anzahl=0; | ^~~~~~ help.c: In function ‘bsort’: help.c:368:13: warning: variable ‘anzahl’ set but not used [-Wunused-but-set-variable] 368 | int i,k,anzahl=0; | ^~~~~~ gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c ort.c -o ort.o gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c os.c -o os.o gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c shift.c -o shift.o gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c statistics.c -o statistics.o gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c student.c -o student.o gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c throw.c -o throw.o gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c welch.c -o welch.o gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c wilcox.c -o wilcox.o wilcox.c: In function ‘wilcoxon’: wilcox.c:37:8: warning: variable ‘overall’ set but not used [-Wunused-but-set-variable] 37 | int overall = 0; | ^~~~~~~ wilcox.c: In function ‘pwilcoxon’: wilcox.c:75:8: warning: variable ‘overall’ set but not used [-Wunused-but-set-variable] 75 | int overall = 0; | ^~~~~~~ gcc -shared -L/home/biocbuild/bbs-3.14-bioc/R/lib -L/usr/local/lib -o cancerclass.so copa.o cor.o fc.o help.o ort.o os.o shift.o statistics.o student.o throw.o welch.o wilcox.o -L/home/biocbuild/bbs-3.14-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.14-bioc/R/library/00LOCK-cancerclass/00new/cancerclass/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cancerclass)