Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:19 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for cghMCR on tokay2


To the developers/maintainers of the cghMCR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/cghMCR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 288/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cghMCR 1.52.0  (landing page)
J. Zhang
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/cghMCR
git_branch: RELEASE_3_14
git_last_commit: 669771b
git_last_commit_date: 2021-10-26 11:49:38 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: cghMCR
Version: 1.52.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/cghMCR_1.52.0.tar.gz && rm -rf cghMCR.buildbin-libdir && mkdir cghMCR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cghMCR.buildbin-libdir cghMCR_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL cghMCR_1.52.0.zip && rm cghMCR_1.52.0.tar.gz cghMCR_1.52.0.zip
StartedAt: 2022-04-12 05:53:54 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 05:56:02 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 127.7 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/cghMCR_1.52.0.tar.gz && rm -rf cghMCR.buildbin-libdir && mkdir cghMCR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cghMCR.buildbin-libdir cghMCR_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL cghMCR_1.52.0.zip && rm cghMCR_1.52.0.tar.gz cghMCR_1.52.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  1 36.5M    1  411k    0     0   727k      0  0:00:51 --:--:--  0:00:51  727k
  5 36.5M    5 1941k    0     0  1238k      0  0:00:30  0:00:01  0:00:29 1239k
 11 36.5M   11 4380k    0     0  1704k      0  0:00:21  0:00:02  0:00:19 1704k
 20 36.5M   20 7778k    0     0  2176k      0  0:00:17  0:00:03  0:00:14 2176k
 32 36.5M   32 11.7M    0     0  2624k      0  0:00:14  0:00:04  0:00:10 2624k
 39 36.5M   39 14.5M    0     0  2663k      0  0:00:14  0:00:05  0:00:09 2882k
 49 36.5M   49 17.9M    0     0  2803k      0  0:00:13  0:00:06  0:00:07 3294k
 61 36.5M   61 22.4M    0     0  3036k      0  0:00:12  0:00:07  0:00:05 3720k
 76 36.5M   76 27.8M    0     0  3327k      0  0:00:11  0:00:08  0:00:03 4149k
 93 36.5M   93 34.1M    0     0  3652k      0  0:00:10  0:00:09  0:00:01 4593k
100 36.5M  100 36.5M    0     0  3768k      0  0:00:09  0:00:09 --:--:-- 5187k

install for i386

* installing *source* package 'cghMCR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'cghMCR'
    finding HTML links ... done
    SGOL-class                              html  
    cghMCR-class                            html  
    cghMCR                                  html  
    mergeMCRProbes                          html  
    methods                                 html  
    plot.DNAcopy                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'cghMCR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cghMCR' as cghMCR_1.52.0.zip
* DONE (cghMCR)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'cghMCR' successfully unpacked and MD5 sums checked