| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:22 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the compcodeR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/compcodeR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 378/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| compcodeR 1.30.0 (landing page) Charlotte Soneson
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: compcodeR |
| Version: 1.30.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/compcodeR_1.30.0.tar.gz && rm -rf compcodeR.buildbin-libdir && mkdir compcodeR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=compcodeR.buildbin-libdir compcodeR_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL compcodeR_1.30.0.zip && rm compcodeR_1.30.0.tar.gz compcodeR_1.30.0.zip |
| StartedAt: 2022-04-12 05:17:32 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:19:50 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 137.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/compcodeR_1.30.0.tar.gz && rm -rf compcodeR.buildbin-libdir && mkdir compcodeR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=compcodeR.buildbin-libdir compcodeR_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL compcodeR_1.30.0.zip && rm compcodeR_1.30.0.tar.gz compcodeR_1.30.0.zip
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100 2346k 100 2346k 0 0 2093k 0 0:00:01 0:00:01 --:--:-- 2095k
install for i386
* installing *source* package 'compcodeR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'compcodeR'
finding HTML links ... done
DESeq2.createRmd html
DSS.createRmd html
EBSeq.createRmd html
NBPSeq.createRmd html
NOISeq.prenorm.createRmd html
TCC.createRmd html
baySeq.createRmd html
checkDataObject html
checkTableConsistency html
check_compData html
check_compData_results html
compData-class html
compData html
compcodeR-package html
convertListTocompData html
convertcompDataToList html
edgeR.GLM.createRmd html
edgeR.exact.createRmd html
generateCodeHTMLs html
generateSyntheticData html
listcreateRmd html
logcpm.limma.createRmd html
runComparison html
runComparisonGUI html
runDiffExp html
show-compData-method html
sqrtcpm.limma.createRmd html
summarizeSyntheticDataSet html
ttest.createRmd html
voom.limma.createRmd html
voom.ttest.createRmd html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'compcodeR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'compcodeR' as compcodeR_1.30.0.zip
* DONE (compcodeR)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'compcodeR' successfully unpacked and MD5 sums checked