Zhen Wei
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/exomePeak2 |
| git_branch: RELEASE_3_14 |
| git_last_commit: 6269c12 |
| git_last_commit_date: 2021-12-10 02:57:09 -0400 (Fri, 10 Dec 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:31 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the exomePeak2 package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/exomePeak2.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 614/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| exomePeak2 1.6.1 (landing page) Zhen Wei
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: exomePeak2 |
| Version: 1.6.1 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/exomePeak2_1.6.1.tar.gz && rm -rf exomePeak2.buildbin-libdir && mkdir exomePeak2.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=exomePeak2.buildbin-libdir exomePeak2_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL exomePeak2_1.6.1.zip && rm exomePeak2_1.6.1.tar.gz exomePeak2_1.6.1.zip |
| StartedAt: 2022-04-12 06:40:15 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:42:50 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 155.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/exomePeak2_1.6.1.tar.gz && rm -rf exomePeak2.buildbin-libdir && mkdir exomePeak2.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=exomePeak2.buildbin-libdir exomePeak2_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL exomePeak2_1.6.1.zip && rm exomePeak2_1.6.1.tar.gz exomePeak2_1.6.1.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
12 2188k 12 272k 0 0 725k 0 0:00:03 --:--:-- 0:00:03 725k
82 2188k 82 1809k 0 0 1317k 0 0:00:01 0:00:01 --:--:-- 1318k
100 2188k 100 2188k 0 0 1404k 0 0:00:01 0:00:01 --:--:-- 1404k
install for i386
* installing *source* package 'exomePeak2' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'exomePeak2'
finding HTML links ... done
GC_content_over_grl html
GCsizeFactors-methods html
GLM_inference html
LibraryType-methods html
MeripBamFileList-class html
finding level-2 HTML links ... done
Parameter-methods html
Results-methods html
SummarizedExomePeak-class html
call_peaks_with_GLM html
convertTxDb html
ctest html
decision_deseq2 html
disj_background html
estimateSeqDepth-methods html
exomePeak2 html
exomePeak2Results-methods html
exomePeakCalling-methods html
exome_bins_from_txdb html
exonPlot html
exons_by_unique_gene html
exportResults-methods html
flank_on_exons html
glmDM-methods html
glmM-methods html
mclust_bg html
normalizeGC-methods html
plotExonLength-methods html
plotLfcGC-methods html
plotReadsGC-methods html
plotSizeFactors-methods html
quiet html
reads_five_POS html
reads_five_POS_rev html
reduce_peaks html
remove_introns html
replace_bg html
scanMeripBAM html
sort_sep html
split_by_name html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'exomePeak2' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'exomePeak2' as exomePeak2_1.6.1.zip
* DONE (exomePeak2)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'exomePeak2' successfully unpacked and MD5 sums checked