| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:40 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the graph package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graph.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 818/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graph 1.72.0 (landing page) Bioconductor Package Maintainer
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: graph |
| Version: 1.72.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/graph_1.72.0.tar.gz && rm -rf graph.buildbin-libdir && mkdir graph.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=graph.buildbin-libdir graph_1.72.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL graph_1.72.0.zip && rm graph_1.72.0.tar.gz graph_1.72.0.zip |
| StartedAt: 2022-04-12 04:19:29 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 04:23:35 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 246.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/graph_1.72.0.tar.gz && rm -rf graph.buildbin-libdir && mkdir graph.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=graph.buildbin-libdir graph_1.72.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL graph_1.72.0.zip && rm graph_1.72.0.tar.gz graph_1.72.0.zip
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install for i386
* installing *source* package 'graph' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c graph.c -o graph.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o graph.dll tmp.def graph.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
mv graph.dll BioC_graph.dll
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/graph.buildbin-libdir/00LOCK-graph/00new/graph/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'graph'
finding HTML links ... done
DFS html
IMCA html
MAPKsig html
MultiGraph-class html
acc-methods html
addEdge html
addNode html
adj-methods html
adjacencyMatrix html
apoptosisGraph html
attrData-class html
attrDataItem-methods html
attrDefaults-methods html
aveNumEdges html
biocRepos html
boundary html
calcProb html
calcSumProb html
clearNode html
clusterGraph-class html
clusteringCoefficient-methods html
combineNodes html
defunct html
distGraph-class html
duplicatedEdges html
edgeData-methods html
edgeDataDefaults-methods html
edgeMatrix html
edgeSets html
edgeWeights html
fromGXL-methods html
graph-class html
graph2SparseM html
graphAM-class html
graphBAM-class html
graphExamples html
graphNEL-class html
inEdges html
internal html
isAdjacent-methods html
isDirected-methods html
leaves html
listEdges html
matrix2Graph html
mostEdges html
multigraph html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/graph.buildbin-libdir/00LOCK-graph/00new/graph/help/multiGraph-class.html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/graph.buildbin-libdir/00LOCK-graph/00new/graph/help/show+2CmultiGraph-method.html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/graph.buildbin-libdir/00LOCK-graph/00new/graph/help/isDirected+2CmultiGraph-method.html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/graph.buildbin-libdir/00LOCK-graph/00new/graph/help/nodes+2CmultiGraph-method.html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/graph.buildbin-libdir/00LOCK-graph/00new/graph/help/numNodes+2CmultiGraph-method.html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/graph.buildbin-libdir/00LOCK-graph/00new/graph/help/edges+2CmultiGraph-method.html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/graph.buildbin-libdir/00LOCK-graph/00new/graph/help/numEdges+2CmultiGraph-method.html
nodeData-methods html
nodeDataDefaults-methods html
numNoEdges html
pancrCaIni html
randomEGraph html
randomGraph html
randomNodeGraph html
removeEdge html
removeNode html
renderInfo-class html
reverseEdgeDirections html
settings html
simpleEdge-class html
standardLabeling html
subGraph html
toDotR-methods html
toDotWithRI html
ugraph html
validGraph html
write.tlp html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'graph' ...
** libs
"C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c graph.c -o graph.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o graph.dll tmp.def graph.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
mv graph.dll BioC_graph.dll
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/graph.buildbin-libdir/graph/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'graph' as graph_1.72.0.zip
* DONE (graph)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'graph' successfully unpacked and MD5 sums checked