| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:53 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the microbiomeExplorer package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/microbiomeExplorer.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1143/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| microbiomeExplorer 1.4.0 (landing page) Janina Reeder
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: microbiomeExplorer |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/microbiomeExplorer_1.4.0.tar.gz && rm -rf microbiomeExplorer.buildbin-libdir && mkdir microbiomeExplorer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=microbiomeExplorer.buildbin-libdir microbiomeExplorer_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL microbiomeExplorer_1.4.0.zip && rm microbiomeExplorer_1.4.0.tar.gz microbiomeExplorer_1.4.0.zip |
| StartedAt: 2022-04-12 06:50:50 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:53:59 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 188.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/microbiomeExplorer_1.4.0.tar.gz && rm -rf microbiomeExplorer.buildbin-libdir && mkdir microbiomeExplorer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=microbiomeExplorer.buildbin-libdir microbiomeExplorer_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL microbiomeExplorer_1.4.0.zip && rm microbiomeExplorer_1.4.0.tar.gz microbiomeExplorer_1.4.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
21 1770k 21 386k 0 0 1139k 0 0:00:01 --:--:-- 0:00:01 1138k
100 1770k 100 1770k 0 0 1974k 0 --:--:-- --:--:-- --:--:-- 1974k
install for i386
* installing *source* package 'microbiomeExplorer' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'microbiomeExplorer'
finding HTML links ... done
abundanceHeatmap html
abundanceHeatmapUI html
addFeatData html
addPhenoData html
add_plotly_config html
add_plotly_layout html
aggFeatures html
aggregationTab html
aggregationTabUI html
alphaDiversity html
alphaDiversityUI html
avgAbundance html
avgAbundanceUI html
betaDiversity html
betaDiversityUI html
betaInput html
betaInputUI html
buildEmptyPlotlyPlot html
buildPlottingDF html
calculatePCAs html
computeCI_Interval html
computeDistMat html
corrAnalysis html
corrAnalysisUI html
corrFeature html
corrInput html
corrInputUI html
corrPhenotype html
createHeader html
dataInput html
dataInputUI html
designPairs html
diffAnalysis html
diffAnalysisUI html
diffInput html
diffInputUI html
diffTable html
diffTableUI html
extendPhenoData html
featAbundance html
featAbundanceUI html
featureAnalysis html
featureAnalysisUI html
featureCorr html
featureCorrUI html
featureInput html
featureInputUI html
featureTable html
featureTableUI html
fileUpload html
fileUploadUI html
filterByPheno html
filterMEData html
generateReport html
getFeatModCode html
getFileType html
getFilterChoices html
getLegendLevel html
getPhenoChanges html
getPhenoModCode html
getWidths html
heatmapInput html
heatmapInputUI html
interAnalysis html
interAnalysisUI html
intraAnalysis html
intraAnalysisUI html
intraInput html
intraInputUI html
longAnalysis html
longAnalysisUI html
longInput html
longInputUI html
longResults html
longResultsUI html
makeQCPlot html
normalizeData html
parseInteractionName html
phenotypeCorr html
phenotypeCorrUI html
phenotypeTable html
phenotypeTableUI html
plotAbundance html
plotAlpha html
plotAvgAbundance html
plotBeta html
plotHeatmap html
plotLongFeature html
plotSingleFeature html
plotlyHistogram html
plotlySampleBarplot html
readData html
relAbundance html
relAbundanceUI html
replaceWithUnknown html
reportList html
reportListUI html
reportRow html
reportRowUI html
rollDownFeatures html
runDiffTest html
runMicrobiomeExplorer html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'microbiomeExplorer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'microbiomeExplorer' as microbiomeExplorer_1.4.0.zip
* DONE (microbiomeExplorer)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'microbiomeExplorer' successfully unpacked and MD5 sums checked