Gregory C Imholte
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/pepStat |
| git_branch: RELEASE_3_14 |
| git_last_commit: 66118b0 |
| git_last_commit_date: 2021-10-26 12:14:27 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:04 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the pepStat package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/pepStat.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1396/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| pepStat 1.28.0 (landing page) Gregory C Imholte
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: pepStat |
| Version: 1.28.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/pepStat_1.28.0.tar.gz && rm -rf pepStat.buildbin-libdir && mkdir pepStat.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pepStat.buildbin-libdir pepStat_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL pepStat_1.28.0.zip && rm pepStat_1.28.0.tar.gz pepStat_1.28.0.zip |
| StartedAt: 2022-04-12 05:01:14 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:02:56 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 101.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/pepStat_1.28.0.tar.gz && rm -rf pepStat.buildbin-libdir && mkdir pepStat.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pepStat.buildbin-libdir pepStat_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL pepStat_1.28.0.zip && rm pepStat_1.28.0.tar.gz pepStat_1.28.0.zip
###
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install for i386
* installing *source* package 'pepStat' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'GenomicRanges' for request: 'mcols<-' when loading 'pepStat'
No methods found in package 'GenomicRanges' for request: 'mcols' when loading 'pepStat'
No methods found in package 'IRanges' for request: 'values<-' when loading 'pepStat'
No methods found in package 'IRanges' for request: 'values' when loading 'pepStat'
** help
*** installing help indices
converting help for package 'pepStat'
finding HTML links ... done
baselineCorrect.pSet html
baseline_correct html
create_db html
finding level-2 HTML links ... done
makeCalls html
makePeptideSet html
normalizeArray html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/pepStat.buildbin-libdir/00LOCK-pepStat/00new/pepStat/help/normalizeArray.html
peptideSet-methods html
peptideSet html
plotArray html
restab html
shinyPepStat html
slidingMean html
summarizePeptides html
** building package indices
** installing vignettes
'pepStat.Rnw'
** testing if installed package can be loaded from temporary location
No methods found in package 'GenomicRanges' for request: 'mcols<-' when loading 'pepStat'
No methods found in package 'GenomicRanges' for request: 'mcols' when loading 'pepStat'
No methods found in package 'IRanges' for request: 'values<-' when loading 'pepStat'
No methods found in package 'IRanges' for request: 'values' when loading 'pepStat'
** testing if installed package can be loaded from final location
No methods found in package 'GenomicRanges' for request: 'mcols<-' when loading 'pepStat'
No methods found in package 'GenomicRanges' for request: 'mcols' when loading 'pepStat'
No methods found in package 'IRanges' for request: 'values<-' when loading 'pepStat'
No methods found in package 'IRanges' for request: 'values' when loading 'pepStat'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'pepStat' ...
** testing if installed package can be loaded
No methods found in package 'GenomicRanges' for request: 'mcols<-' when loading 'pepStat'
No methods found in package 'GenomicRanges' for request: 'mcols' when loading 'pepStat'
No methods found in package 'IRanges' for request: 'values<-' when loading 'pepStat'
No methods found in package 'IRanges' for request: 'values' when loading 'pepStat'
* MD5 sums
packaged installation of 'pepStat' as pepStat_1.28.0.zip
* DONE (pepStat)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'pepStat' successfully unpacked and MD5 sums checked