Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:17 -0400 (Wed, 13 Apr 2022).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the rWikiPathways package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rWikiPathways.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1684/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
rWikiPathways 1.14.0 (landing page) Egon Willighagen
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: rWikiPathways |
Version: 1.14.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/rWikiPathways_1.14.0.tar.gz && rm -rf rWikiPathways.buildbin-libdir && mkdir rWikiPathways.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rWikiPathways.buildbin-libdir rWikiPathways_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL rWikiPathways_1.14.0.zip && rm rWikiPathways_1.14.0.tar.gz rWikiPathways_1.14.0.zip |
StartedAt: 2022-04-12 06:02:45 -0400 (Tue, 12 Apr 2022) |
EndedAt: 2022-04-12 06:06:11 -0400 (Tue, 12 Apr 2022) |
EllapsedTime: 206.1 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/rWikiPathways_1.14.0.tar.gz && rm -rf rWikiPathways.buildbin-libdir && mkdir rWikiPathways.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rWikiPathways.buildbin-libdir rWikiPathways_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL rWikiPathways_1.14.0.zip && rm rWikiPathways_1.14.0.tar.gz rWikiPathways_1.14.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 5 9509k 5 492k 0 0 619k 0 0:00:15 --:--:-- 0:00:15 619k 18 9509k 18 1742k 0 0 968k 0 0:00:09 0:00:01 0:00:08 968k 41 9509k 41 3954k 0 0 1418k 0 0:00:06 0:00:02 0:00:04 1418k 74 9509k 74 7059k 0 0 1856k 0 0:00:05 0:00:03 0:00:02 1856k 100 9509k 100 9509k 0 0 2143k 0 0:00:04 0:00:04 --:--:-- 2143k install for i386 * installing *source* package 'rWikiPathways' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'rWikiPathways' finding HTML links ... done downloadPathwayArchive html findPathwayIdsByLiterature html findPathwayIdsByText html findPathwayIdsByXref html findPathwayNamesByLiterature html findPathwayNamesByText html findPathwayNamesByXref html findPathwayUrlsByLiterature html findPathwayUrlsByText html findPathwayUrlsByXref html findPathwaysByLiterature html findPathwaysByText html findPathwaysByXref html getCurationTagNames html getCurationTags html getEveryCurationTag html getOntologyTermIds html getOntologyTermNames html getOntologyTerms html getPathway html getPathwayHistory html getPathwayIdsByCurationTag html getPathwayIdsByOntologyTerm html getPathwayIdsByParentOntologyTerm html getPathwayInfo html getPathwaysByCurationTag html getPathwaysByOntologyTerm html getPathwaysByParentOntologyTerm html getRecentChanges html getRecentChangesIds html getRecentChangesNames html getXrefList html listOrganisms html listPathwayIds html listPathwayNames html listPathwayUrls html listPathways html readGMT html readGMTnames html readPathwayGMT html wikipathwaysAPI html wikipathwaysGET html writeGMT html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'rWikiPathways' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'rWikiPathways' as rWikiPathways_1.14.0.zip * DONE (rWikiPathways) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'rWikiPathways' successfully unpacked and MD5 sums checked