Bernat Gel
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/regioneR |
| git_branch: RELEASE_3_14 |
| git_last_commit: ef1a9c9 |
| git_last_commit_date: 2022-01-12 07:46:43 -0400 (Wed, 12 Jan 2022) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:12 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the regioneR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/regioneR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1573/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| regioneR 1.26.1 (landing page) Bernat Gel
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: regioneR |
| Version: 1.26.1 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/regioneR_1.26.1.tar.gz && rm -rf regioneR.buildbin-libdir && mkdir regioneR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=regioneR.buildbin-libdir regioneR_1.26.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL regioneR_1.26.1.zip && rm regioneR_1.26.1.tar.gz regioneR_1.26.1.zip |
| StartedAt: 2022-04-12 06:11:46 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:13:09 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 83.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/regioneR_1.26.1.tar.gz && rm -rf regioneR.buildbin-libdir && mkdir regioneR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=regioneR.buildbin-libdir regioneR_1.26.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL regioneR_1.26.1.zip && rm regioneR_1.26.1.tar.gz regioneR_1.26.1.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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install for i386
* installing *source* package 'regioneR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'regioneR'
finding HTML links ... done
characterToBSGenome html
finding level-2 HTML links ... done
circularRandomizeRegions html
commonRegions html
createFunctionsList html
createRandomRegions html
emptyCacheRegioneR html
extendRegions html
filterChromosomes html
getChromosomesByOrganism html
getGenome html
getGenomeAndMask html
getMask html
joinRegions html
listChrTypes html
localZScore html
maskFromBSGenome html
meanDistance html
meanInRegions html
mergeRegions html
numOverlaps html
overlapGraphicalSummary html
overlapPermTest html
overlapRegions html
permTest html
plot.localZScoreResults html
plot.localZScoreResultsList html
plot.permTestResults html
plot.permTestResultsList html
plotRegions html
print.permTestResults html
randomizeRegions html
recomputePermTest html
resampleRegions html
splitRegions html
subtractRegions html
summary.permTestResults html
summary.permTestResultsList html
toDataframe html
toGRanges html
uniqueRegions html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'regioneR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'regioneR' as regioneR_1.26.1.zip
* DONE (regioneR)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'regioneR' successfully unpacked and MD5 sums checked