Back to Multiple platform build/check report for BioC 3.14
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

This page was generated on 2022-04-13 12:07:12 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for rexposome on tokay2


To the developers/maintainers of the rexposome package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rexposome.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1584/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rexposome 1.16.0  (landing page)
Xavier Escribà Montagut
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/rexposome
git_branch: RELEASE_3_14
git_last_commit: 42df3c5
git_last_commit_date: 2021-10-26 12:36:52 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: rexposome
Version: 1.16.0
Command: rm -rf rexposome.buildbin-libdir && mkdir rexposome.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rexposome.buildbin-libdir rexposome_1.16.0.tar.gz
StartedAt: 2022-04-13 06:57:42 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 06:58:31 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 48.4 seconds
RetCode: 0
Status:   OK  
PackageFile: rexposome_1.16.0.zip
PackageFileSize: 5.955 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf rexposome.buildbin-libdir && mkdir rexposome.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rexposome.buildbin-libdir rexposome_1.16.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'rexposome' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'rexposome'
    finding HTML links ... done
    ExWAS-class                             html  
    ExposomeClust-class                     html  
    ExposomeCorr-class                      html  
    finding level-2 HTML links ... done

    ExposomePCA-class                       html  
    ExposomeSet-class                       html  
    classification-methods                  html  
    clustering-methods                      html  
    correlation-methods                     html  
    ex_imp                                  html  
    expo                                    html  
    expo_c                                  html  
    expos-methods                           html  
    exposureNames-methods                   html  
    extract-methods                         html  
    exwas-methods                           html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/rexposome.buildbin-libdir/00LOCK-rexposome/00new/rexposome/help/exwas.html
    familyNames-methods                     html  
    highAndLow-methods                      html  
    ilod-methods                            html  
    imExposomeSet-class                     html  
    imputation-methods                      html  
    imputeLOD                               html  
    invExWAS-methods                        html  
    loadExposome                            html  
    loadExposome_plain                      html  
    loadImputed                             html  
    mExWAS-class                            html  
    me                                      html  
    mexwas-methods                          html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/rexposome.buildbin-libdir/00LOCK-rexposome/00new/rexposome/help/mexwas.html
    ndim-methods                            html  
    normalityTest-methods                   html  
    pca-methods                             html  
    phenotypeNames-methods                  html  
    plot3PCA-methods                        html  
    plotClassification-methods              html  
    plotCorrelation-methods                 html  
    plotEXP-methods                         html  
    plotEffect-methods                      html  
    plotExwas-methods                       html  
    plotFamily-methods                      html  
    plotHistogram-methods                   html  
    plotLOD-methods                         html  
    plotMissings-methods                    html  
    plotPCA-methods                         html  
    plotPHE-methods                         html  
    plotVolcano-methods                     html  
    readExposome                            html  
    rexposome                               html  
    standardize-methods                     html  
    tableLOD-methods                        html  
    tableMissings-methods                   html  
    tef-methods                             html  
    toES                                    html  
    trans-methods                           html  
    volcano_plot                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'rexposome' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'rexposome' as rexposome_1.16.0.zip
* DONE (rexposome)