| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:20 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the segmentSeq package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/segmentSeq.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1755/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| segmentSeq 2.28.0 (landing page) Thomas J. Hardcastle
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: segmentSeq |
| Version: 2.28.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/segmentSeq_2.28.0.tar.gz && rm -rf segmentSeq.buildbin-libdir && mkdir segmentSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=segmentSeq.buildbin-libdir segmentSeq_2.28.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL segmentSeq_2.28.0.zip && rm segmentSeq_2.28.0.tar.gz segmentSeq_2.28.0.zip |
| StartedAt: 2022-04-12 05:48:20 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:50:41 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 140.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/segmentSeq_2.28.0.tar.gz && rm -rf segmentSeq.buildbin-libdir && mkdir segmentSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=segmentSeq.buildbin-libdir segmentSeq_2.28.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL segmentSeq_2.28.0.zip && rm segmentSeq_2.28.0.tar.gz segmentSeq_2.28.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
13 2360k 13 324k 0 0 957k 0 0:00:02 --:--:-- 0:00:02 956k
100 2360k 100 2360k 0 0 1808k 0 0:00:01 0:00:01 --:--:-- 1809k
install for i386
* installing *source* package 'segmentSeq' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'segmentSeq'
finding HTML links ... done
SL html
alignmentClass-class html
alignmentData-class html
alignmentMeth-class html
averageMethylationRegions html
finding level-2 HTML links ... done
classifySeg html
findChunks html
getCounts html
getOverlaps html
givenExpression html
hSL html
heuristicSeg html
lociData-class html
lociLikelihoods html
mergeMethSegs html
methData-class html
normaliseNC html
plotGenome html
plotMeth html
plotMethDistribution html
processAD html
readMethods html
readMeths html
segClass-class html
segData-class html
segMeth-class html
segmentSeq-package html
selectLoci html
summariseLoci html
thresholdFinder html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'segmentSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'segmentSeq' as segmentSeq_2.28.0.zip
* DONE (segmentSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'segmentSeq' successfully unpacked and MD5 sums checked