Mahmoud Ahmed
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/segmenter |
| git_branch: RELEASE_3_14 |
| git_last_commit: 45aa76e |
| git_last_commit_date: 2021-10-26 13:10:57 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:20 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the segmenter package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/segmenter.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1754/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| segmenter 1.0.0 (landing page) Mahmoud Ahmed
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: segmenter |
| Version: 1.0.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/segmenter_1.0.0.tar.gz && rm -rf segmenter.buildbin-libdir && mkdir segmenter.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=segmenter.buildbin-libdir segmenter_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL segmenter_1.0.0.zip && rm segmenter_1.0.0.tar.gz segmenter_1.0.0.zip |
| StartedAt: 2022-04-12 07:10:19 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:11:59 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 100.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/segmenter_1.0.0.tar.gz && rm -rf segmenter.buildbin-libdir && mkdir segmenter.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=segmenter.buildbin-libdir segmenter_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL segmenter_1.0.0.zip && rm segmenter_1.0.0.tar.gz segmenter_1.0.0.zip
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
2 3923k 2 99687 0 0 510k 0 0:00:07 --:--:-- 0:00:07 509k
48 3923k 48 1911k 0 0 1622k 0 0:00:02 0:00:01 0:00:01 1622k
100 3923k 100 3923k 0 0 2018k 0 0:00:01 0:00:01 --:--:-- 2018k
install for i386
* installing *source* package 'segmenter' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'segmenter'
finding HTML links ... done
accessors html
annotate_segments html
binarize_bam html
binarize_bed html
compare_models html
count_reads_ranges html
dot-Binarize html
dot-LearnModel html
emissions_file html
enrichment_files html
get_frequency html
get_width html
learn_model html
merge_segments_bins html
methods html
model_file html
overlap_files html
plot_heatmap html
range_bins html
range_counts html
read_bam_file html
read_bins_file html
read_cellmark_file html
read_chromsize_file html
read_emissions_file html
read_enrichment_file html
read_model_file html
read_overlap_file html
read_segements_file html
read_transitions_file html
segmentation html
segments_files html
test_obj html
test_objs html
tidy_ranges html
transitions_file html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'segmenter' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'segmenter' as segmenter_1.0.0.zip
* DONE (segmenter)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'segmenter' successfully unpacked and MD5 sums checked