Multiple platform build/check report for BioC 3.17 - BUILD results for CoGAPS on merida1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 22.04.2 LTS)	x86_64	4.3.1 (2023-06-16) -- "Beagle Scouts"	4626
palomino3	Windows Server 2022 Datacenter	x64	4.3.1 (2023-06-16 ucrt) -- "Beagle Scouts"	4379
merida1	macOS 12.6.4 Monterey	x86_64	4.3.1 (2023-06-16) -- "Beagle Scouts"	4395
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

To the developers/maintainers of the CoGAPS package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CoGAPS.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data CoGAPS
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* checking for file ‘CoGAPS/DESCRIPTION’ ... OK
* preparing ‘CoGAPS’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running ‘cleanup’
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘CoGAPS.Rmd’ using rmarkdown
Data Model: Dense, Normal
Sampler Type: Sequential
Loading Data...Done! (00:00:00)
-- Equilibration Phase --
10000 of 50000, Atoms: 74(A), 39(P), ChiSq: 322, Time: 00:00:00 / 00:00:00
20000 of 50000, Atoms: 80(A), 44(P), ChiSq: 188, Time: 00:00:01 / 00:00:05
30000 of 50000, Atoms: 87(A), 41(P), ChiSq: 147, Time: 00:00:01 / 00:00:03
40000 of 50000, Atoms: 78(A), 42(P), ChiSq: 144, Time: 00:00:02 / 00:00:05
50000 of 50000, Atoms: 89(A), 39(P), ChiSq: 105, Time: 00:00:03 / 00:00:06
-- Sampling Phase --
10000 of 50000, Atoms: 76(A), 39(P), ChiSq: 124, Time: 00:00:04 / 00:00:07
20000 of 50000, Atoms: 74(A), 46(P), ChiSq: 114, Time: 00:00:05 / 00:00:07
30000 of 50000, Atoms: 78(A), 43(P), ChiSq: 137, Time: 00:00:06 / 00:00:07
40000 of 50000, Atoms: 80(A), 44(P), ChiSq: 124, Time: 00:00:06 / 00:00:06
50000 of 50000, Atoms: 80(A), 42(P), ChiSq: 116, Time: 00:00:07 / 00:00:07
trying URL 'https://zenodo.org/record/7709664/files/inputdata.Rds?download=1'
Content type 'application/octet-stream' length 433262849 bytes (413.2 MB)
=====================================
downloaded 313.8 MB


Quitting from lines 235-240 [load single cell data from zenodo] (CoGAPS.Rmd)
Error: processing vignette 'CoGAPS.Rmd' failed with diagnostics:
download from 'https://zenodo.org/record/7709664/files/inputdata.Rds?download=1' failed
--- failed re-building ‘CoGAPS.Rmd’

SUMMARY: processing the following file failed:
  ‘CoGAPS.Rmd’

Error: Vignette re-building failed.
Execution halted

BUILD results for CoGAPS on merida1

Summary

Command output