Back to Build/check report for BioC 3.17 experimental data |
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This page was generated on 2023-10-12 14:51:35 -0400 (Thu, 12 Oct 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) | x86_64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4626 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 193/421 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
IlluminaDataTestFiles 1.38.0 (landing page) Kasper Daniel Hansen
| nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) / x86_64 | OK | OK | OK | ||||||||
To the developers/maintainers of the IlluminaDataTestFiles package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: IlluminaDataTestFiles |
Version: 1.38.0 |
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:IlluminaDataTestFiles.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings IlluminaDataTestFiles_1.38.0.tar.gz |
StartedAt: 2023-10-12 11:32:08 -0400 (Thu, 12 Oct 2023) |
EndedAt: 2023-10-12 11:32:18 -0400 (Thu, 12 Oct 2023) |
EllapsedTime: 10.0 seconds |
RetCode: 0 |
Status: OK |
CheckDir: IlluminaDataTestFiles.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:IlluminaDataTestFiles.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings IlluminaDataTestFiles_1.38.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.17-data-experiment/meat/IlluminaDataTestFiles.Rcheck’ * using R version 4.3.1 (2023-06-16) * using platform: x86_64-pc-linux-gnu (64-bit) * R was compiled by gcc (Ubuntu 11.3.0-1ubuntu1~22.04.1) 11.3.0 GNU Fortran (Ubuntu 11.3.0-1ubuntu1~22.04.1) 11.3.0 * running under: Ubuntu 22.04.3 LTS * using session charset: UTF-8 * checking for file ‘IlluminaDataTestFiles/DESCRIPTION’ ... OK * this is package ‘IlluminaDataTestFiles’ version ‘1.38.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘IlluminaDataTestFiles’ can be installed ... OK * checking installed package size ... NOTE installed size is 29.5Mb sub-directories of 1Mb or more: extdata 29.4Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... NONE * checking PDF version of manual ... OK * DONE Status: 2 NOTEs See ‘/home/biocbuild/bbs-3.17-data-experiment/meat/IlluminaDataTestFiles.Rcheck/00check.log’ for details.
IlluminaDataTestFiles.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL IlluminaDataTestFiles ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/site-library’ * installing *source* package ‘IlluminaDataTestFiles’ ... ** using staged installation ** inst ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IlluminaDataTestFiles)