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BioC 3.2: BUILD BIN report for GUIDEseq on perceval

This page was generated on 2015-10-10 13:36:58 -0400 (Sat, 10 Oct 2015).

Package 475/1101HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GUIDEseq 0.99.6
Lihua Julie Zhu
Snapshot Date: 2015-10-09 19:24:07 -0400 (Fri, 09 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GUIDEseq
Last Changed Rev: 109252 / Revision: 109459
Last Changed Date: 2015-10-06 14:49:46 -0400 (Tue, 06 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  OK [ ERROR ]
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GUIDEseq
Version: 0.99.6
Command: rm -rf GUIDEseq.buildbin-libdir && mkdir GUIDEseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh GUIDEseq_0.99.6.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R GUIDEseq.buildbin-libdir
StartedAt: 2015-10-10 11:54:08 -0400 (Sat, 10 Oct 2015)
EndedAt: 2015-10-10 11:54:51 -0400 (Sat, 10 Oct 2015)
EllapsedTime: 43.2 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf GUIDEseq.buildbin-libdir && mkdir GUIDEseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh GUIDEseq_0.99.6.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R GUIDEseq.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=GUIDEseq.buildbin-libdir GUIDEseq_0.99.6.tar.gz'
>>>>>>> 

* installing *source* package ‘GUIDEseq’ ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (GUIDEseq)


Installation problem: before you can use the /Users/biocbuild/BBS/utils/macosx-make-tgz.sh script, you must
install chown-rootadmin in the same directory as /Users/biocbuild/BBS/utils/macosx-make-tgz.sh like this:
  cd /Users/biocbuild/BBS/utils
  gcc chown-rootadmin.c -o chown-rootadmin
  sudo chown root:admin chown-rootadmin
  sudo chmod 4750 chown-rootadmin