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BioC experimental data: CHECK report for WES.1KG.WUGSC on linux1.bioconductor.org

This page was generated on 2015-10-24 18:52:39 -0400 (Sat, 24 Oct 2015).

Package 249/257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
WES.1KG.WUGSC 1.2.0
Yuchao Jiang
Snapshot Date: 2015-10-24 12:50:03 -0400 (Sat, 24 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_2/experiment/pkgs/WES.1KG.WUGSC
Last Changed Rev: 3460 / Revision: 3473
Last Changed Date: 2015-10-13 16:14:23 -0400 (Tue, 13 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK [ OK ]UNNEEDED, same version exists in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK  OK 

Summary

Package: WES.1KG.WUGSC
Version: 1.2.0
Command: /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD check --no-vignettes --timings WES.1KG.WUGSC_1.2.0.tar.gz
StartedAt: 2015-10-24 15:33:34 -0400 (Sat, 24 Oct 2015)
EndedAt: 2015-10-24 15:33:52 -0400 (Sat, 24 Oct 2015)
EllapsedTime: 18.1 seconds
RetCode: 0
Status:  OK 
CheckDir: WES.1KG.WUGSC.Rcheck
Warnings: 0

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD check --no-vignettes --timings WES.1KG.WUGSC_1.2.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.2-data-experiment/meat/WES.1KG.WUGSC.Rcheck’
* using R version 3.2.2 (2015-08-14)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘WES.1KG.WUGSC/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘WES.1KG.WUGSC’ version ‘1.2.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘WES.1KG.WUGSC’ can be installed ... [1s/1s] OK
* checking installed package size ... NOTE
  installed size is 374.0Mb
  sub-directories of 1Mb or more:
    extdata  373.9Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.2-data-experiment/meat/WES.1KG.WUGSC.Rcheck/00check.log’
for details.

WES.1KG.WUGSC.Rcheck/00install.out:

* installing *source* package ‘WES.1KG.WUGSC’ ...
** inst
** help
No man pages found in package  ‘WES.1KG.WUGSC’ 
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (WES.1KG.WUGSC)