BioC experimental data: CHECK report for iontreeData on perceval

Package: iontreeData

Version: 1.5.0

Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings iontreeData_1.5.0.tar.gz

StartedAt: 2015-08-22 09:29:50 -0700 (Sat, 22 Aug 2015)

EndedAt: 2015-08-22 09:30:11 -0700 (Sat, 22 Aug 2015)

EllapsedTime: 20.6 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: iontreeData.Rcheck

Warnings: 1

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings iontreeData_1.5.0.tar.gz
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* using log directory ‘/Users/biocbuild/bbs-3.2-data-experiment/meat/iontreeData.Rcheck’
* using R version 3.2.2 Patched (2015-08-14 r69078)
* using platform: x86_64-apple-darwin10.8.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘iontreeData/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘iontreeData’ version ‘1.5.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘iontreeData’ can be installed ... [1s/1s] OK
* checking installed package size ... NOTE
  installed size is  9.3Mb
  sub-directories of 1Mb or more:
    data    1.4Mb
    mzxml   7.2Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... NOTE
prepare_Rd: MS2RAW.Rd:14-15: Dropping empty section \details
prepare_Rd: MS2RAW.Rd:19-20: Dropping empty section \references
prepare_Rd: MS3RAW.Rd:14-15: Dropping empty section \details
prepare_Rd: MS3RAW.Rd:19-20: Dropping empty section \references
prepare_Rd: iontreeData-package.Rd:29-30: Dropping empty section \seealso
prepare_Rd: iontreeData-package.Rd:31-32: Dropping empty section \examples
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
             old_size new_size compress
  MS2RAW.rda    1.1Mb    913Kb       xz
  MS3RAW.rda    274Kb    218Kb       xz
* checking examples ... [1s/1s] OK
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 2 NOTEs
See
  ‘/Users/biocbuild/bbs-3.2-data-experiment/meat/iontreeData.Rcheck/00check.log’
for details.

* installing *source* package ‘iontreeData’ ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (iontreeData)

name	user	system	elapsed
MS2RAW	0.052	0.006	0.087
MS3RAW	0.012	0.001	0.026