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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data densvis
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* checking for file ‘densvis/DESCRIPTION’ ... OK
* preparing ‘densvis’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘densvis.Rmd’ using rmarkdown
2025-03-19 16:43:14.474 R[8784:445129473] XType: com.apple.fonts is not accessible.
2025-03-19 16:43:14.475 R[8784:445129473] XType: XTFontStaticRegistry is enabled.
python-build: use openssl from homebrew
python-build: use readline from homebrew
Downloading Python-3.11.4.tar.xz...
-> https://www.python.org/ftp/python/3.11.4/Python-3.11.4.tar.xz
Installing Python-3.11.4...
python-build: use readline from homebrew
python-build: use ncurses from homebrew
python-build: use zlib from xcode sdk
Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "/Users/biocbuild/.pyenv/versions/3.11.4/lib/python3.11/tkinter/__init__.py", line 38, in <module>
    import _tkinter # If this fails your Python may not be configured for Tk
    ^^^^^^^^^^^^^^^
ModuleNotFoundError: No module named '_tkinter'
WARNING: The Python tkinter extension was not compiled and GUI subsystem has been detected. Missing the Tk toolkit?
Installed Python-3.11.4 to /Users/biocbuild/.pyenv/versions/3.11.4
Requirement already satisfied: pip in /Users/biocbuild/Library/Caches/org.R-project.R/R/basilisk/1.19.2/densvis/1.17.0/densvis/lib/python3.11/site-packages (23.1.2)
Collecting pip
  Downloading pip-25.0.1-py3-none-any.whl (1.8 MB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.8/1.8 MB 9.2 MB/s eta 0:00:00
Collecting wheel
  Using cached wheel-0.45.1-py3-none-any.whl (72 kB)
Requirement already satisfied: setuptools in /Users/biocbuild/Library/Caches/org.R-project.R/R/basilisk/1.19.2/densvis/1.17.0/densvis/lib/python3.11/site-packages (65.5.0)
Collecting setuptools
  Downloading setuptools-77.0.1-py3-none-any.whl (1.3 MB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.3/1.3 MB 14.1 MB/s eta 0:00:00
Installing collected packages: wheel, setuptools, pip
  Attempting uninstall: setuptools
    Found existing installation: setuptools 65.5.0
    Uninstalling setuptools-65.5.0:
      Successfully uninstalled setuptools-65.5.0
  Attempting uninstall: pip
    Found existing installation: pip 23.1.2
    Uninstalling pip-23.1.2:
      Successfully uninstalled pip-23.1.2
Successfully installed pip-25.0.1 setuptools-77.0.1 wheel-0.45.1
ERROR: Could not find a version that satisfies the requirement python==3.11.4 (from versions: none)
ERROR: No matching distribution found for python==3.11.4

Quitting from densvis.Rmd:122-130 [run-densmap]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Error installing package(s): "'python==3.11.4'", "'umap-learn==0.5.3'", "'scikit-learn==1.3.0'", "'numba==0.57.1'", "'pynndescent==0.5.10'", "'scipy==1.11.1'", "'numpy==1.24.4'"
---
Backtrace:
    ▆
 1. └─densvis::densmap(data[, 1:2], dens_frac = 0.5, dens_lambda = 0.5)
 2.   └─densvis::umap(..., densmap = TRUE)
 3.     └─basilisk::basiliskStart(python_env)
 4.       └─basilisk::obtainEnvironmentPath(env)
 5.         └─basilisk::setupBasiliskEnv(...)
 6.           └─reticulate::virtualenv_install(...)
 7.             └─reticulate:::pip_install(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'densvis.Rmd' failed with diagnostics:
Error installing package(s): "'python==3.11.4'", "'umap-learn==0.5.3'", "'scikit-learn==1.3.0'", "'numba==0.57.1'", "'pynndescent==0.5.10'", "'scipy==1.11.1'", "'numpy==1.24.4'"
--- failed re-building ‘densvis.Rmd’

SUMMARY: processing the following file failed:
  ‘densvis.Rmd’

Error: Vignette re-building failed.
Execution halted