Multiple platform build/check report for BioC 3.21 - BUILD results for epivizrServer on palomino7

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.1 LTS)	x86_64	R Under development (unstable) (2025-03-13 r87965) -- "Unsuffered Consequences"	4777
palomino7	Windows Server 2022 Datacenter	x64	R Under development (unstable) (2025-03-01 r87860 ucrt) -- "Unsuffered Consequences"	4545
lconway	macOS 12.7.1 Monterey	x86_64	R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences"	4576
kjohnson3	macOS 13.7.1 Ventura	arm64	R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences"	4528
kunpeng2	Linux (openEuler 24.03 LTS)	aarch64	R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences"	4458
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for epivizrServer on palomino7

To the developers/maintainers of the epivizrServer package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/epivizrServer.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: epivizrServer

Version: 1.35.0

Command: chmod a+r epivizrServer -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data epivizrServer

StartedAt: 2025-03-20 18:38:17 -0400 (Thu, 20 Mar 2025)

EndedAt: 2025-03-20 18:38:26 -0400 (Thu, 20 Mar 2025)

EllapsedTime: 9.0 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

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###
### Running command:
###
###   chmod a+r epivizrServer -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data epivizrServer
###
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* checking for file 'epivizrServer/DESCRIPTION' ... OK
* preparing 'epivizrServer':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'epivizrServer.Rmd' using rmarkdown
createTcpServer: address already in use

Quitting from epivizrServer.Rmd:23-56 [unnamed-chunk-1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `value[[3L]]()`:
! Error starting epivizServer, likely because port 7123 is in use.
Try a different port number or setting try_ports=TRUE (see ?startEpiviz).
---
Backtrace:
    ▆
 1. └─server$start_server()
 2.   └─base::tryCatch(...)
 3.     └─base (local) tryCatchList(expr, classes, parentenv, handlers)
 4.       └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
 5.         └─value[[3L]](cond)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'epivizrServer.Rmd' failed with diagnostics:
Error starting epivizServer, likely because port 7123 is in use.
Try a different port number or setting try_ports=TRUE (see ?startEpiviz).
--- failed re-building 'epivizrServer.Rmd'

SUMMARY: processing the following file failed:
  'epivizrServer.Rmd'

Error: Vignette re-building failed.
Execution halted