Britta Velten
| Snapshot Date: 2026-02-27 13:40 -0500 (Fri, 27 Feb 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-02-28 11:34 -0500 (Sat, 28 Feb 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences" | 4877 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences" | 4570 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 926/2357 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-02-28 00:20:32 -0500 (Sat, 28 Feb 2026) |
| EndedAt: 2026-02-28 00:22:03 -0500 (Sat, 28 Feb 2026) |
| EllapsedTime: 91.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2026-01-15 r89304)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-843.946
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-547.799
ELB improved by 296.147
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-492.252
ELB improved by 55.5477
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.509
ELB improved by 36.7424
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.252
ELB improved by 16.2574
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.024
ELB improved by 6.22768
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.489
ELB improved by 3.53524
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.747
ELB improved by 2.74216
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.295
ELB improved by 2.45196
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.905
ELB improved by 2.38963
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.46
ELB improved by 2.44526
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.878
ELB improved by 2.58174
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.069
ELB improved by 2.80932
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.906
ELB improved by 3.16275
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.271
ELB improved by 3.63491
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.227
ELB improved by 4.04437
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.201
ELB improved by 4.02569
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.8
ELB improved by 3.40113
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.335
ELB improved by 2.46493
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.681
ELB improved by 1.6541
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.552
ELB improved by 1.12885
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.742
ELB improved by 0.810339
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.145
ELB improved by 0.597229
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.696
ELB improved by 0.448769
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.344
ELB improved by 0.351836
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.052
ELB improved by 0.291595
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.799
ELB improved by 0.253616
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.571
ELB improved by 0.228195
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.361
ELB improved by 0.209842
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.165
ELB improved by 0.195607
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.981
ELB improved by 0.183882
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.807
ELB improved by 0.173749
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.643
ELB improved by 0.164649
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.487
ELB improved by 0.156222
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.338
ELB improved by 0.148218
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.198
ELB improved by 0.140464
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.065
ELB improved by 0.132852
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.94
ELB improved by 0.125334
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.822
ELB improved by 0.117927
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.711
ELB improved by 0.110697
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.607
ELB improved by 0.103732
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.51
ELB improved by 0.0971249
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.419
ELB improved by 0.0909459
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.334
ELB improved by 0.0852408
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.254
ELB improved by 0.0800282
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.179
ELB improved by 0.0753041
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.108
ELB improved by 0.0710479
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.04
ELB improved by 0.0672279
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.977
ELB improved by 0.0638064
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.916
ELB improved by 0.0607426
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.858
ELB improved by 0.0579961
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.802
ELB improved by 0.0555281
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.749
ELB improved by 0.0533023
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.698
ELB improved by 0.0512862
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.648
ELB improved by 0.0494504
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.601
ELB improved by 0.0477696
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.554
ELB improved by 0.0462214
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.51
ELB improved by 0.0447874
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.466
ELB improved by 0.0434518
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.424
ELB improved by 0.0422021
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.383
ELB improved by 0.0410287
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.343
ELB improved by 0.0399247
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.304
ELB improved by 0.0388858
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.266
ELB improved by 0.0379106
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.229
ELB improved by 0.0370004
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.193
ELB improved by 0.0361596
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.158
ELB improved by 0.0353961
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.123
ELB improved by 0.0347215
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.089
ELB improved by 0.0341525
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.055
ELB improved by 0.033712
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.022
ELB improved by 0.0334315
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.988
ELB improved by 0.0333541
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.955
ELB improved by 0.0335394
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.921
ELB improved by 0.0340699
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.886
ELB improved by 0.0350595
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.849
ELB improved by 0.0366627
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.81
ELB improved by 0.0390779
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.767
ELB improved by 0.0425278
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.72
ELB improved by 0.0471784
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.667
ELB improved by 0.0529352
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.608
ELB improved by 0.0590981
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.544
ELB improved by 0.0640953
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.478
ELB improved by 0.0658839
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.415
ELB improved by 0.0632856
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.358
ELB improved by 0.0570659
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.308
ELB improved by 0.0492866
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.267
ELB improved by 0.0417356
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.231
ELB improved by 0.0352079
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.202
ELB improved by 0.0297816
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.176
ELB improved by 0.0252782
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.155
ELB improved by 0.021505
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.137
ELB improved by 0.0183182
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.121
ELB improved by 0.0156173
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.108
ELB improved by 0.013328
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.096
ELB improved by 0.0113913
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.087
ELB improved by 0.00975714
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-899.702
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-594.882
ELB improved by 304.82
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-534.038
ELB improved by 60.8441
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.081
ELB improved by 39.957
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.074
ELB improved by 19.0068
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.01
ELB improved by 8.0646
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.088
ELB improved by 4.92176
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.995
ELB improved by 4.09276
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.148
ELB improved by 3.84723
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.498
ELB improved by 3.64993
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.253
ELB improved by 3.24536
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.624
ELB improved by 2.62911
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.644
ELB improved by 1.97931
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.194
ELB improved by 1.45029
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.124
ELB improved by 1.07012
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.308
ELB improved by 0.81547
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.65
ELB improved by 0.658386
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.09
ELB improved by 0.55964
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.612
ELB improved by 0.478419
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.216
ELB improved by 0.396049
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.897
ELB improved by 0.319195
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.64
ELB improved by 0.256784
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.43
ELB improved by 0.209636
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.256
ELB improved by 0.174558
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.108
ELB improved by 0.148062
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.98
ELB improved by 0.127509
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.869
ELB improved by 0.111165
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.771
ELB improved by 0.0979367
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.684
ELB improved by 0.087109
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.606
ELB improved by 0.0781784
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.535
ELB improved by 0.0707657
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.47
ELB improved by 0.0645769
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.411
ELB improved by 0.0593832
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.356
ELB improved by 0.0550069
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.305
ELB improved by 0.0513104
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.257
ELB improved by 0.0481878
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.211
ELB improved by 0.0455568
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.168
ELB improved by 0.043354
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.126
ELB improved by 0.0415299
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.086
ELB improved by 0.0400464
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.047
ELB improved by 0.0388743
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.009
ELB improved by 0.0379918
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.972
ELB improved by 0.0373831
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.935
ELB improved by 0.037038
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.898
ELB improved by 0.0369507
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.861
ELB improved by 0.0371204
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.823
ELB improved by 0.0375502
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.785
ELB improved by 0.0382475
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.746
ELB improved by 0.0392243
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.705
ELB improved by 0.0404971
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.663
ELB improved by 0.042087
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.619
ELB improved by 0.044021
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.573
ELB improved by 0.0463314
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.524
ELB improved by 0.0490571
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.471
ELB improved by 0.0522443
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.416
ELB improved by 0.0559468
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.355
ELB improved by 0.0602269
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.29
ELB improved by 0.0651563
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.219
ELB improved by 0.0708163
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.142
ELB improved by 0.0772981
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.057
ELB improved by 0.0847022
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.964
ELB improved by 0.0931379
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.861
ELB improved by 0.10272
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.748
ELB improved by 0.113566
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.622
ELB improved by 0.125789
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.483
ELB improved by 0.139494
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.328
ELB improved by 0.154769
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.156
ELB improved by 0.171684
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.966
ELB improved by 0.190304
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.755
ELB improved by 0.21073
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.522
ELB improved by 0.233198
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.264
ELB improved by 0.258261
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.977
ELB improved by 0.287098
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.655
ELB improved by 0.321868
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.289
ELB improved by 0.3658
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.867
ELB improved by 0.421883
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.379
ELB improved by 0.48819
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.828
ELB improved by 0.550635
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.243
ELB improved by 0.584738
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.668
ELB improved by 0.575813
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.136
ELB improved by 0.531964
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.665
ELB improved by 0.470491
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.262
ELB improved by 0.403559
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.925
ELB improved by 0.336901
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.651
ELB improved by 0.273749
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.433
ELB improved by 0.217875
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.26
ELB improved by 0.173115
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.119
ELB improved by 0.141251
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.997
ELB improved by 0.121417
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.886
ELB improved by 0.110821
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.781
ELB improved by 0.105531
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.679
ELB improved by 0.101771
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.581
ELB improved by 0.0981883
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.484
ELB improved by 0.0970544
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.382
ELB improved by 0.102397
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.265
ELB improved by 0.117011
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.125
ELB improved by 0.139921
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.962
ELB improved by 0.16226
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.796
ELB improved by 0.166065
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.651
ELB improved by 0.145072
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.528
ELB improved by 0.122889
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.406
ELB improved by 0.121928
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.259
ELB improved by 0.147437
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.051
ELB improved by 0.208288
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.719
ELB improved by 0.331298
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.192
ELB improved by 0.527805
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.537
ELB improved by 0.654349
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.982
ELB improved by 0.555099
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.596
ELB improved by 0.386212
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.346
ELB improved by 0.249854
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.194
ELB improved by 0.152258
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.099
ELB improved by 0.0949109
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.032
ELB improved by 0.0666874
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.977
ELB improved by 0.0547783
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.926
ELB improved by 0.0513775
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.874
ELB improved by 0.052222
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.82
ELB improved by 0.0541906
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.766
ELB improved by 0.054124
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.716
ELB improved by 0.0496535
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.675
ELB improved by 0.0410996
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.643
ELB improved by 0.0312913
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.621
ELB improved by 0.0229368
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.604
ELB improved by 0.0169867
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.59
ELB improved by 0.0131092
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.58
ELB improved by 0.0106369
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.571
ELB improved by 0.0090245
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-893.669
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-612.471
ELB improved by 281.198
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-551.006
ELB improved by 61.4652
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-500.116
ELB improved by 50.8901
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.456
ELB improved by 28.6594
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.251
ELB improved by 12.2057
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.785
ELB improved by 5.46535
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.31
ELB improved by 3.47506
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.504
ELB improved by 2.80617
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.963
ELB improved by 2.54116
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.532
ELB improved by 2.43112
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.136
ELB improved by 2.3961
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.732
ELB improved by 2.40326
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.312
ELB improved by 2.42036
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.911
ELB improved by 2.40086
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.613
ELB improved by 2.29779
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.523
ELB improved by 2.09086
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.739
ELB improved by 1.78355
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.351
ELB improved by 1.38793
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.38
ELB improved by 0.971349
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.742
ELB improved by 0.637271
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.32
ELB improved by 0.42235
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.021
ELB improved by 0.299368
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.789
ELB improved by 0.231464
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.595
ELB improved by 0.193837
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.422
ELB improved by 0.172945
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.261
ELB improved by 0.161856
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.104
ELB improved by 0.157061
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.947
ELB improved by 0.156744
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.787
ELB improved by 0.159852
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.621
ELB improved by 0.165551
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.448
ELB improved by 0.172911
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.268
ELB improved by 0.180894
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.079
ELB improved by 0.188662
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.883
ELB improved by 0.195952
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.68
ELB improved by 0.203064
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.469
ELB improved by 0.210488
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.251
ELB improved by 0.218577
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.023
ELB improved by 0.227505
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.786
ELB improved by 0.237388
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.538
ELB improved by 0.248398
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.277
ELB improved by 0.260817
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.002
ELB improved by 0.275103
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.71
ELB improved by 0.292033
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.396
ELB improved by 0.313127
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.055
ELB improved by 0.341773
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.668
ELB improved by 0.38632
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.2
ELB improved by 0.468417
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.561
ELB improved by 0.639221
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.604
ELB improved by 0.956237
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.359
ELB improved by 1.24554
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.186
ELB improved by 1.17322
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.238
ELB improved by 0.947736
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.466
ELB improved by 0.77186
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.809
ELB improved by 0.656716
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.218
ELB improved by 0.591103
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.653
ELB improved by 0.565622
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.072
ELB improved by 0.581096
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.421
ELB improved by 0.650726
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.672
ELB improved by 0.748601
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.888
ELB improved by 0.784001
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.199
ELB improved by 0.689178
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.695
ELB improved by 0.503934
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.367
ELB improved by 0.328629
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.157
ELB improved by 0.209436
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.018
ELB improved by 0.139312
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.919
ELB improved by 0.0990033
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.844
ELB improved by 0.0746442
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.785
ELB improved by 0.0587935
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.738
ELB improved by 0.0477926
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.698
ELB improved by 0.0398061
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.664
ELB improved by 0.0338385
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.635
ELB improved by 0.0293008
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.609
ELB improved by 0.0258212
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.586
ELB improved by 0.0231592
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.564
ELB improved by 0.0211617
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.545
ELB improved by 0.0197412
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.526
ELB improved by 0.0188666
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.507
ELB improved by 0.0185633
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.488
ELB improved by 0.0189227
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.468
ELB improved by 0.0201202
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.446
ELB improved by 0.0224377
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.42
ELB improved by 0.0262752
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.387
ELB improved by 0.0321084
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.347
ELB improved by 0.0403023
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.296
ELB improved by 0.0506715
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.235
ELB improved by 0.0617981
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.164
ELB improved by 0.0705561
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.091
ELB improved by 0.0729661
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.024
ELB improved by 0.0670756
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.969
ELB improved by 0.0552499
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.927
ELB improved by 0.0421836
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.895
ELB improved by 0.0311765
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.872
ELB improved by 0.0231323
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.855
ELB improved by 0.0176379
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.841
ELB improved by 0.013973
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.829
ELB improved by 0.0115241
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.819
ELB improved by 0.00986035
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-878.527
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-571.582
ELB improved by 306.945
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-513.96
ELB improved by 57.622
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.582
ELB improved by 36.378
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.298
ELB improved by 16.2844
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.767
ELB improved by 6.53042
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.286
ELB improved by 3.48126
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.603
ELB improved by 2.68305
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.179
ELB improved by 2.42455
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.833
ELB improved by 2.3451
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.485
ELB improved by 2.34858
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.092
ELB improved by 2.39272
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.675
ELB improved by 2.41682
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.345
ELB improved by 2.3302
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.281
ELB improved by 2.0646
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.632
ELB improved by 1.64835
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.431
ELB improved by 1.2012
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.594
ELB improved by 0.837452
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.998
ELB improved by 0.595057
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.545
ELB improved by 0.453636
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.165
ELB improved by 0.379653
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.817
ELB improved by 0.347828
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.474
ELB improved by 0.343238
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.116
ELB improved by 0.357711
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.73
ELB improved by 0.38594
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.308
ELB improved by 0.422905
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.844
ELB improved by 0.463729
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.338
ELB improved by 0.505784
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.788
ELB improved by 0.550176
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.187
ELB improved by 0.600693
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.525
ELB improved by 0.662241
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.784
ELB improved by 0.740986
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.938
ELB improved by 0.845732
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.949
ELB improved by 0.989305
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.76
ELB improved by 1.1893
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.293
ELB improved by 1.46699
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.455
ELB improved by 1.83808
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.182
ELB improved by 2.27278
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.563
ELB improved by 2.61897
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.905
ELB improved by 2.65795
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.557
ELB improved by 2.34796
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.692
ELB improved by 1.86445
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.275
ELB improved by 1.41762
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.211
ELB improved by 1.06374
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.448
ELB improved by 0.763311
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.892
ELB improved by 0.555594
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.461
ELB improved by 0.430947
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.146
ELB improved by 0.315083
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.944
ELB improved by 0.202397
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.819
ELB improved by 0.124807
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.736
ELB improved by 0.0825881
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.676
ELB improved by 0.0606322
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.627
ELB improved by 0.0482335
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.587
ELB improved by 0.0402901
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.553
ELB improved by 0.0346088
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.522
ELB improved by 0.0302304
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.496
ELB improved by 0.0266988
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.472
ELB improved by 0.0237707
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.451
ELB improved by 0.0213003
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.431
ELB improved by 0.0191912
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.414
ELB improved by 0.0173748
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.398
ELB improved by 0.0158004
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.384
ELB improved by 0.0144283
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.371
ELB improved by 0.0132273
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.358
ELB improved by 0.0121722
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.347
ELB improved by 0.0112421
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.337
ELB improved by 0.0104199
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.327
ELB improved by 0.00969085
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.373 0.214 2.576
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.053 | 0.012 | 0.067 | |
| getPIPs | 0.052 | 0.011 | 0.062 | |
| graper | 0.08 | 0.02 | 0.10 | |
| makeExampleData | 0.011 | 0.001 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.010 | 0.003 | 0.012 | |
| plotELBO | 0.328 | 0.024 | 0.352 | |
| plotGroupPenalties | 1.041 | 0.062 | 1.103 | |
| plotPosterior | 0.655 | 0.014 | 0.670 | |
| predict.graper | 2.042 | 0.083 | 2.127 | |
| print.graper | 0.054 | 0.007 | 0.062 | |