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BioC 3.4: INSTALL report for CellNOptR on zin1

This page was generated on 2016-09-21 03:37:36 -0700 (Wed, 21 Sep 2016).

Package 168/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellNOptR 1.19.0
T.Cokelaer
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CellNOptR
Last Changed Rev: 117081 / Revision: 121152
Last Changed Date: 2016-05-03 14:30:44 -0700 (Tue, 03 May 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: CellNOptR
Version: 1.19.0
Command: /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD INSTALL CellNOptR
StartedAt: 2016-09-19 20:18:34 -0700 (Mon, 19 Sep 2016)
EndedAt: 2016-09-19 20:18:38 -0700 (Mon, 19 Sep 2016)
EllapsedTime: 4.5 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD INSTALL CellNOptR
###
##############################################################################
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* installing to library ‘/home/biocbuild/bbs-3.4-bioc/R/library’
* installing *source* package ‘CellNOptR’ ...
** libs
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include   -I./include  -fpic  -g -O2  -Wall -c getFit.c -o getFit.o
getFit.c: In function ‘getFit’:
getFit.c:47:6: warning: unused variable ‘nReacs’ [-Wunused-variable]
  int nReacs = INTEGER(nReacs_in)[0];
      ^
getFit.c:42:6: warning: unused variable ‘selCounter’ [-Wunused-variable]
  int selCounter = 0;
      ^
getFit.c:41:6: warning: unused variable ‘selection’ [-Wunused-variable]
  int selection[40];
      ^
getFit.c:40:6: warning: unused variable ‘or_max’ [-Wunused-variable]
  int or_max = 0;
      ^
getFit.c:39:6: warning: unused variable ‘curr_max’ [-Wunused-variable]
  int curr_max = 0;
      ^
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include   -I./include  -fpic  -g -O2  -Wall -c simulatorT1.c -o simulatorT1.o
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include   -I./include  -fpic  -g -O2  -Wall -c simulatorTN.c -o simulatorTN.o
gcc -shared -L/home/biocbuild/bbs-3.4-bioc/R/lib -L/usr/local/lib -o CellNOptR.so getFit.o simulatorT1.o simulatorTN.o -L/home/biocbuild/bbs-3.4-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.4-bioc/R/library/CellNOptR/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (CellNOptR)