BioC 3.4: CHECK report for a4 on moscato1

Package: a4

Version: 1.21.0

Command: rm -rf a4.buildbin-libdir a4.Rcheck && mkdir a4.buildbin-libdir a4.Rcheck && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=a4.buildbin-libdir a4_1.21.0.tar.gz >a4.Rcheck\00install.out 2>&1 && cp a4.Rcheck\00install.out a4-install.out && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD check --library=a4.buildbin-libdir --install="check:a4-install.out" --force-multiarch --no-vignettes --timings a4_1.21.0.tar.gz

StartedAt: 2016-09-20 03:26:38 -0700 (Tue, 20 Sep 2016)

EndedAt: 2016-09-20 03:29:43 -0700 (Tue, 20 Sep 2016)

EllapsedTime: 184.1 seconds

RetCode: 0

Status:  OK

CheckDir: a4.Rcheck

Warnings: 0

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### Running command:
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###   rm -rf a4.buildbin-libdir a4.Rcheck && mkdir a4.buildbin-libdir a4.Rcheck && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=a4.buildbin-libdir a4_1.21.0.tar.gz >a4.Rcheck\00install.out 2>&1 && cp a4.Rcheck\00install.out a4-install.out  && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD check --library=a4.buildbin-libdir --install="check:a4-install.out" --force-multiarch --no-vignettes --timings a4_1.21.0.tar.gz
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* using log directory 'D:/biocbld/bbs-3.4-bioc/meat/a4.Rcheck'
* using R version 3.3.1 (2016-06-21)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'a4/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'a4' version '1.21.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'a4' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  'a4Base' 'a4Classif' 'a4Core' 'a4Preproc' 'a4Reporting'
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.onAttach: no visible global function definition for
  'packageDescription'
Undefined global functions or variables:
  packageDescription
Consider adding
  importFrom("utils", "packageDescription")
to your NAMESPACE file.
* checking for missing documentation entries ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 3 NOTEs
See
  'D:/biocbld/bbs-3.4-bioc/meat/a4.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'a4' ...
** R
** inst
** preparing package for lazy loading
** help
No man pages found in package  'a4' 
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'a4' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'a4' as a4_1.21.0.zip
* DONE (a4)