Back to the "Multiple platform build/check report" A  B  C  D  E  F [G] H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.4: INSTALL report for genomation on zin1

This page was generated on 2016-09-21 03:39:29 -0700 (Wed, 21 Sep 2016).

Package 488/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
genomation 1.5.5
Altuna Akalin , Vedran Franke
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/genomation
Last Changed Rev: 119336 / Revision: 121152
Last Changed Date: 2016-07-13 04:58:20 -0700 (Wed, 13 Jul 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: genomation
Version: 1.5.5
Command: /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD INSTALL genomation
StartedAt: 2016-09-19 20:19:46 -0700 (Mon, 19 Sep 2016)
EndedAt: 2016-09-19 20:20:10 -0700 (Mon, 19 Sep 2016)
EllapsedTime: 24.2 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD INSTALL genomation
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.4-bioc/R/library’
* installing *source* package ‘genomation’ ...
** libs
g++ -std=c++11 -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include -I"/home/biocbuild/bbs-3.4-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/include"   -fpic  -g -O2 -c RcppExports.cpp -o RcppExports.o
g++ -std=c++11 -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include -I"/home/biocbuild/bbs-3.4-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/include"   -fpic  -g -O2 -c idxstats.cpp -o idxstats.o
g++ -std=c++11 -shared -L/home/biocbuild/bbs-3.4-bioc/R/lib -L/usr/local/lib -o genomation.so RcppExports.o idxstats.o -L/home/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/lib -Wl,-rpath,/home/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/lib -lhts -lz -pthread -L/home/biocbuild/bbs-3.4-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.4-bioc/R/library/genomation/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   ‘GenomationManual-knitr.Rmd’ using ‘UTF-8’ 
** testing if installed package can be loaded
* DONE (genomation)