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BioC 3.4: INSTALL report for ggbio on moscato1

This page was generated on 2016-09-21 03:43:55 -0700 (Wed, 21 Sep 2016).

Package 512/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ggbio 1.21.5
Michael Lawrence
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggbio
Last Changed Rev: 120671 / Revision: 121152
Last Changed Date: 2016-09-01 22:34:01 -0700 (Thu, 01 Sep 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  OK  OK  ERROR 
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 [ OK ] OK  ERROR  OK 
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  ERROR  OK 

Summary

Package: ggbio
Version: 1.21.5
Command: rm -rf ggbio.buildbin-libdir && mkdir ggbio.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/ggbio_1.21.5.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=ggbio.buildbin-libdir --merge-multiarch ggbio_1.21.5.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL ggbio_1.21.5.zip && rm ggbio_1.21.5.tar.gz ggbio_1.21.5.zip
StartedAt: 2016-09-19 21:04:47 -0700 (Mon, 19 Sep 2016)
EndedAt: 2016-09-19 21:05:59 -0700 (Mon, 19 Sep 2016)
EllapsedTime: 71.7 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf ggbio.buildbin-libdir && mkdir ggbio.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/ggbio_1.21.5.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=ggbio.buildbin-libdir --merge-multiarch ggbio_1.21.5.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL ggbio_1.21.5.zip  && rm ggbio_1.21.5.tar.gz ggbio_1.21.5.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1308k  100 1308k    0     0  34.6M      0 --:--:-- --:--:-- --:--:-- 37.5M

install for i386

* installing *source* package 'ggbio' ...
** R
** inst
** preparing package for lazy loading
Warning: subclass "ExonrankFilter" of class "BasicFilter" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning: subclass "SymbolFilter" of class "BasicFilter" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning: subclass "OnlyCodingTx" of class "BasicFilter" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning: subclass "ExonrankFilter" of class "BasicFilter" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning: subclass "SymbolFilter" of class "BasicFilter" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning: subclass "OnlyCodingTx" of class "BasicFilter" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Creating a new generic function for 'rescale' in package 'ggbio'
Creating a new generic function for 'xlim' in package 'ggbio'
Creating a generic function for 'print' from package 'base' in package 'ggbio'
Creating a new generic function for 'geom_rect' in package 'ggbio'
Creating a new generic function for 'geom_segment' in package 'ggbio'
Creating a new generic function for 'geom_bar' in package 'ggbio'
Creating a new generic function for 'stat_identity' in package 'ggbio'
Creating a new generic function for 'stat_bin' in package 'ggbio'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'ggbio' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ggbio' as ggbio_1.21.5.zip
* DONE (ggbio)
* installing to library 'D:/biocbld/bbs-3.4-bioc/R/library'
package 'ggbio' successfully unpacked and MD5 sums checked