pdInfoBuilder 1.37.1 Benilton Carvalho
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016) | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/pdInfoBuilder | Last Changed Rev: 120519 / Revision: 121152 | Last Changed Date: 2016-08-26 12:00:42 -0700 (Fri, 26 Aug 2016) |
| zin1 | Linux (Ubuntu 16.04 LTS) / x86_64 | NotNeeded | OK | OK | | |
moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | NotNeeded | OK | OK | OK | |
morelia | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | OK | [ OK ] | |
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### Running command:
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### rm -rf pdInfoBuilder.buildbin-libdir && mkdir pdInfoBuilder.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh pdInfoBuilder_1.37.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R pdInfoBuilder.buildbin-libdir
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>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=pdInfoBuilder.buildbin-libdir pdInfoBuilder_1.37.1.tar.gz'
>>>>>>>
* installing *source* package ‘pdInfoBuilder’ ...
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -fPIC -Wall -mtune=core2 -g -O2 -c pdInfoBuilder.c -o pdInfoBuilder.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o pdInfoBuilder.so pdInfoBuilder.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-3.4-bioc/meat/pdInfoBuilder.buildbin-libdir/pdInfoBuilder/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (pdInfoBuilder)
>>>>>>>
>>>>>>> FIXING LINKS FOR pdInfoBuilder.buildbin-libdir/pdInfoBuilder/libs//pdInfoBuilder.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libgcc_s.1.dylib" "pdInfoBuilder.buildbin-libdir/pdInfoBuilder/libs//pdInfoBuilder.so"
install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libgfortran.3.dylib" "pdInfoBuilder.buildbin-libdir/pdInfoBuilder/libs//pdInfoBuilder.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libreadline.5.2.dylib" "pdInfoBuilder.buildbin-libdir/pdInfoBuilder/libs//pdInfoBuilder.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libreadline.dylib" "pdInfoBuilder.buildbin-libdir/pdInfoBuilder/libs//pdInfoBuilder.so"
install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libquadmath.0.dylib" "pdInfoBuilder.buildbin-libdir/pdInfoBuilder/libs//pdInfoBuilder.so"