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BioC 3.4: INSTALL report for DirichletMultinomial on tokay1

This page was generated on 2017-04-15 16:17:15 -0400 (Sat, 15 Apr 2017).

Package 332/1296HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DirichletMultinomial 1.16.0
Martin Morgan
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/DirichletMultinomial
Last Changed Rev: 122710 / Revision: 128728
Last Changed Date: 2016-10-17 14:45:06 -0400 (Mon, 17 Oct 2016)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: DirichletMultinomial
Version: 1.16.0
Command: rm -rf DirichletMultinomial.buildbin-libdir && mkdir DirichletMultinomial.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.4/bioc/src/contrib/DirichletMultinomial_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=DirichletMultinomial.buildbin-libdir --merge-multiarch DirichletMultinomial_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL DirichletMultinomial_1.16.0.zip && rm DirichletMultinomial_1.16.0.tar.gz DirichletMultinomial_1.16.0.zip
StartedAt: 2017-04-14 18:06:41 -0400 (Fri, 14 Apr 2017)
EndedAt: 2017-04-14 18:07:38 -0400 (Fri, 14 Apr 2017)
EllapsedTime: 57.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf DirichletMultinomial.buildbin-libdir && mkdir DirichletMultinomial.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.4/bioc/src/contrib/DirichletMultinomial_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=DirichletMultinomial.buildbin-libdir --merge-multiarch DirichletMultinomial_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL DirichletMultinomial_1.16.0.zip  && rm DirichletMultinomial_1.16.0.tar.gz DirichletMultinomial_1.16.0.zip
###
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100  195k  100  195k    0     0  16.2M      0 --:--:-- --:--:-- --:--:-- 17.3M

install for i386

* installing *source* package 'DirichletMultinomial' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I/src/include -I/i386/include    -I"C:/local323/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c R_init_DirichletMultinomial.c -o R_init_DirichletMultinomial.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I/src/include -I/i386/include    -I"C:/local323/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c dirichlet_fit.c -o dirichlet_fit.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I/src/include -I/i386/include    -I"C:/local323/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c dirichlet_fit_main.c -o dirichlet_fit_main.o
dirichlet_fit_main.c: In function 'dirichlet_fit_main':
dirichlet_fit_main.c:542:17: warning: variable 'status' set but not used [-Wunused-but-set-variable]
     int signum, status;
                 ^
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o DirichletMultinomial.dll tmp.def R_init_DirichletMultinomial.o dirichlet_fit.o dirichlet_fit_main.o -L/i386/lib -lgsl -lgslcblas -lm -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.4-bioc/meat/DirichletMultinomial.buildbin-libdir/DirichletMultinomial/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'DirichletMultinomial' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I/src/include -I/x64/include    -I"C:/local323/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c R_init_DirichletMultinomial.c -o R_init_DirichletMultinomial.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I/src/include -I/x64/include    -I"C:/local323/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c dirichlet_fit.c -o dirichlet_fit.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I/src/include -I/x64/include    -I"C:/local323/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c dirichlet_fit_main.c -o dirichlet_fit_main.o
dirichlet_fit_main.c: In function 'dirichlet_fit_main':
dirichlet_fit_main.c:542:17: warning: variable 'status' set but not used [-Wunused-but-set-variable]
     int signum, status;
                 ^
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o DirichletMultinomial.dll tmp.def R_init_DirichletMultinomial.o dirichlet_fit.o dirichlet_fit_main.o -L/x64/lib -lgsl -lgslcblas -lm -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.4-bioc/meat/DirichletMultinomial.buildbin-libdir/DirichletMultinomial/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DirichletMultinomial' as DirichletMultinomial_1.16.0.zip
* DONE (DirichletMultinomial)
* installing to library 'C:/Users/biocbuild/bbs-3.4-bioc/R/library'
package 'DirichletMultinomial' successfully unpacked and MD5 sums checked