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BioC 3.4: BUILD report for EWCE on morelia

This page was generated on 2017-04-15 16:27:25 -0400 (Sat, 15 Apr 2017).

Package 393/1296HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EWCE 1.2.0
Nathan Skene
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/EWCE
Last Changed Rev: 122710 / Revision: 128728
Last Changed Date: 2016-10-17 14:45:06 -0400 (Mon, 17 Oct 2016)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  ERROR  skipped 
tokay1 Windows Server 2012 R2 Standard / x64  NotNeeded  ERROR  skipped  skipped 
morelia Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded [ ERROR ] skipped  skipped 

Summary

Package: EWCE
Version: 1.2.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data EWCE
StartedAt: 2017-04-14 20:40:52 -0700 (Fri, 14 Apr 2017)
EndedAt: 2017-04-14 20:41:47 -0700 (Fri, 14 Apr 2017)
EllapsedTime: 54.9 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data EWCE
###
##############################################################################
##############################################################################


* checking for file ‘EWCE/DESCRIPTION’ ... OK
* preparing ‘EWCE’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 138 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 217 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 138 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 50 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 490 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 519 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 332 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 345 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 199 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 221 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 221 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 221 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 413 rows containing non-finite values (stat_boxplot).
Warning: The plyr::rename operation has created duplicates for the following name(s): (`colour`)
Warning: Transformation introduced infinite values in continuous y-axis
Warning: Removed 335 rows containing non-finite values (stat_boxplot).
Quitting from lines 238-242 (EWCE.Rmd) 
Error: processing vignette 'EWCE.Rmd' failed with diagnostics:
Invalid attribute(s): percentage_gc_content 
Please use the function 'listAttributes' to get valid attribute names
Execution halted