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BioC 3.4: BUILD report for jmosaics on zin1

This page was generated on 2016-05-02 10:49:45 -0700 (Mon, 02 May 2016).

Package 612/1213HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
jmosaics 1.11.2
Xin Zeng
Snapshot Date: 2016-05-01 16:20:05 -0700 (Sun, 01 May 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/jmosaics
Last Changed Rev: 116522 / Revision: 116959
Last Changed Date: 2016-04-18 21:24:16 -0700 (Mon, 18 Apr 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  NotNeeded [ ERROR ] skipped 
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  NotNeeded  ERROR  skipped  skipped 

Summary

Package: jmosaics
Version: 1.11.2
Command: /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data jmosaics
StartedAt: 2016-05-01 18:44:57 -0700 (Sun, 01 May 2016)
EndedAt: 2016-05-01 18:45:14 -0700 (Sun, 01 May 2016)
EllapsedTime: 16.5 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data jmosaics
###
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* checking for file ‘jmosaics/DESCRIPTION’ ... OK
* preparing ‘jmosaics’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: mosaics
Loading required package: Rcpp
Warning: Package 'jmosaics' is deprecated and will be removed from Bioconductor
  version 3.3

Error: processing vignette 'jmosaics.Rnw' failed with diagnostics:
 chunk 6 (label = readBinsMultiple) 
Error in FUN(X[[i]], ...) : 
  no slot of name "seqDepth" for this object of class "BinData"
Execution halted