multtest 2.30.0 Katherine S. Pollard
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017) | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/multtest | Last Changed Rev: 122710 / Revision: 128728 | Last Changed Date: 2016-10-17 14:45:06 -0400 (Mon, 17 Oct 2016) |
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | |
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |
morelia | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | WARNINGS | [ OK ] | |
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### Running command:
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### rm -rf multtest.buildbin-libdir && mkdir multtest.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh multtest_2.30.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R multtest.buildbin-libdir
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>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=multtest.buildbin-libdir multtest_2.30.0.tar.gz'
>>>>>>>
* installing *source* package ‘multtest’ ...
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -DUSEDOUBLE -fPIC -Wall -mtune=core2 -g -O2 -c Rpack.c -o Rpack.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -DUSEDOUBLE -fPIC -Wall -mtune=core2 -g -O2 -c VScount.c -o VScount.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -DUSEDOUBLE -fPIC -Wall -mtune=core2 -g -O2 -c block_sampling_fixed.c -o block_sampling_fixed.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -DUSEDOUBLE -fPIC -Wall -mtune=core2 -g -O2 -c bootloop.c -o bootloop.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -DUSEDOUBLE -fPIC -Wall -mtune=core2 -g -O2 -c mt.c -o mt.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -DUSEDOUBLE -fPIC -Wall -mtune=core2 -g -O2 -c pairt_sampling.c -o pairt_sampling.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -DUSEDOUBLE -fPIC -Wall -mtune=core2 -g -O2 -c pairt_sampling_fixed.c -o pairt_sampling_fixed.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -DUSEDOUBLE -fPIC -Wall -mtune=core2 -g -O2 -c random.c -o random.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -DUSEDOUBLE -fPIC -Wall -mtune=core2 -g -O2 -c sampling.c -o sampling.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -DUSEDOUBLE -fPIC -Wall -mtune=core2 -g -O2 -c sampling_fixed.c -o sampling_fixed.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -DUSEDOUBLE -fPIC -Wall -mtune=core2 -g -O2 -c stat_func.c -o stat_func.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -DUSEDOUBLE -fPIC -Wall -mtune=core2 -g -O2 -c stat_order.c -o stat_order.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o multtest.so Rpack.o VScount.o block_sampling_fixed.o bootloop.o mt.o pairt_sampling.o pairt_sampling_fixed.o random.o sampling.o sampling_fixed.o stat_func.o stat_order.o -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-3.4-bioc/meat/multtest.buildbin-libdir/multtest/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (multtest)
>>>>>>>
>>>>>>> FIXING LINKS FOR multtest.buildbin-libdir/multtest/libs//multtest.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libgcc_s.1.dylib" "multtest.buildbin-libdir/multtest/libs//multtest.so"
install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libgfortran.3.dylib" "multtest.buildbin-libdir/multtest/libs//multtest.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libreadline.5.2.dylib" "multtest.buildbin-libdir/multtest/libs//multtest.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libreadline.dylib" "multtest.buildbin-libdir/multtest/libs//multtest.so"
install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libquadmath.0.dylib" "multtest.buildbin-libdir/multtest/libs//multtest.so"