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BioC 3.4: INSTALL report for chimera on moscato1

This page was generated on 2016-09-21 03:44:39 -0700 (Wed, 21 Sep 2016).

Package 183/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
chimera 1.15.0
Raffaele A Calogero
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/chimera
Last Changed Rev: 117081 / Revision: 121152
Last Changed Date: 2016-05-03 14:30:44 -0700 (Tue, 03 May 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: chimera
Version: 1.15.0
Command: rm -rf chimera.buildbin-libdir && mkdir chimera.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/chimera_1.15.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=chimera.buildbin-libdir --merge-multiarch chimera_1.15.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL chimera_1.15.0.zip && rm chimera_1.15.0.tar.gz chimera_1.15.0.zip
StartedAt: 2016-09-19 21:03:42 -0700 (Mon, 19 Sep 2016)
EndedAt: 2016-09-19 21:04:46 -0700 (Mon, 19 Sep 2016)
EllapsedTime: 63.4 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf chimera.buildbin-libdir && mkdir chimera.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/chimera_1.15.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=chimera.buildbin-libdir --merge-multiarch chimera_1.15.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL chimera_1.15.0.zip  && rm chimera_1.15.0.tar.gz chimera_1.15.0.zip
###
##############################################################################
##############################################################################


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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0 2017k    0  7055    0     0   465k      0  0:00:04 --:--:--  0:00:04  574k
100 2017k  100 2017k    0     0  60.1M      0 --:--:-- --:--:-- --:--:-- 65.6M

install for i386

* installing *source* package 'chimera' ...
** libs
C:/Rtools/mingw_32/bin/g++  -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG     -I"c:/local323/include"     -O2 -Wall  -mtune=core2 -c StarParser.cpp -o StarParser.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o chimera.dll tmp.def StarParser.o -Lc:/local323/lib/i386 -Lc:/local323/lib -LD:/biocbld/BBS-3˜1.4-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-3.4-bioc/meat/chimera.buildbin-libdir/chimera/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'chimera' ...
** libs
C:/Rtools/mingw_64/bin/g++  -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG     -I"c:/local323/include"     -O2 -Wall  -mtune=core2 -c StarParser.cpp -o StarParser.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o chimera.dll tmp.def StarParser.o -Lc:/local323/lib/x64 -Lc:/local323/lib -LD:/biocbld/BBS-3˜1.4-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-3.4-bioc/meat/chimera.buildbin-libdir/chimera/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'chimera' as chimera_1.15.0.zip
* DONE (chimera)
* installing to library 'D:/biocbld/bbs-3.4-bioc/R/library'
package 'chimera' successfully unpacked and MD5 sums checked