diffHic 1.5.5
Aaron Lun
| Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/diffHic | | Last Changed Rev: 120744 / Revision: 121152 | | Last Changed Date: 2016-09-06 03:51:50 -0700 (Tue, 06 Sep 2016) |
| zin1 | Linux (Ubuntu 16.04 LTS) / x86_64 | NotNeeded | OK | OK | |  |
| moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | NotNeeded | OK | OK | [ OK ] | |
| morelia | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | OK | OK | |
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### Running command:
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### cd diffHic.buildbin-libdir/diffHic && zip -r ../../diffHic_1.5.5.zip . & cd ../..
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adding: CITATION (188 bytes security) (deflated 41%)
adding: DESCRIPTION (188 bytes security) (deflated 43%)
adding: doc/ (208 bytes security) (stored 0%)
adding: doc/bam2hdf.R (188 bytes security) (deflated 65%)
adding: doc/diffHic.pdf (188 bytes security) (deflated 6%)
adding: doc/diffHic.Rnw (188 bytes security) (deflated 50%)
adding: doc/diffHicUsersGuide.pdf (188 bytes security) (deflated 17%)
adding: doc/index.html (188 bytes security) (deflated 63%)
adding: doc/sra2bam.sh (188 bytes security) (deflated 58%)
adding: exdata/ (208 bytes security) (stored 0%)
adding: exdata/cuts.rds (188 bytes security) (stored 0%)
adding: exdata/generator.R (188 bytes security) (deflated 80%)
adding: exdata/hic_sort.bam (188 bytes security) (stored 0%)
adding: help/ (208 bytes security) (stored 0%)
adding: help/aliases.rds (188 bytes security) (stored 0%)
adding: help/AnIndex (188 bytes security) (deflated 63%)
adding: help/diffHic.rdb (188 bytes security) (deflated 0%)
adding: help/diffHic.rdx (188 bytes security) (stored 0%)
adding: help/paths.rds (188 bytes security) (stored 0%)
adding: html/ (208 bytes security) (stored 0%)
adding: html/00Index.html (188 bytes security) (deflated 78%)
adding: html/R.css (188 bytes security) (deflated 75%)
adding: INDEX (188 bytes security) (deflated 64%)
adding: libs/ (208 bytes security) (stored 0%)
adding: libs/i386/ (208 bytes security) (stored 0%)
adding: libs/i386/diffHic.dll (188 bytes security) (deflated 60%)
adding: libs/x64/ (208 bytes security) (stored 0%)
adding: libs/x64/diffHic.dll (188 bytes security) (deflated 65%)
adding: MD5 (188 bytes security) (deflated 49%)
adding: Meta/ (208 bytes security) (stored 0%)
adding: Meta/hsearch.rds (188 bytes security) (stored 0%)
adding: Meta/links.rds (188 bytes security) (stored 0%)
adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
adding: Meta/package.rds (188 bytes security) (stored 0%)
adding: Meta/Rd.rds (188 bytes security) (stored 0%)
adding: Meta/vignette.rds (188 bytes security) (stored 0%)
adding: NAMESPACE (188 bytes security) (deflated 46%)
adding: NEWS.Rd (188 bytes security) (deflated 57%)
adding: python/ (208 bytes security) (stored 0%)
adding: python/iter_map.py (188 bytes security) (deflated 62%)
adding: python/presplit_map.py (188 bytes security) (deflated 63%)
adding: R/ (208 bytes security) (stored 0%)
adding: R/diffHic (188 bytes security) (deflated 41%)
adding: R/diffHic.rdb (188 bytes security) (deflated 17%)
adding: R/diffHic.rdx (188 bytes security) (stored 0%)
adding: tests/ (208 bytes security) (stored 0%)
adding: tests/run_all_tests.sh (188 bytes security) (deflated 25%)
adding: tests/simcounts.R (188 bytes security) (deflated 63%)
adding: tests/simsam.R (188 bytes security) (deflated 59%)
adding: tests/test-anno.R (188 bytes security) (deflated 74%)
adding: tests/test-anno.Rout.save (188 bytes security) (deflated 74%)
adding: tests/test-box.R (188 bytes security) (deflated 67%)
adding: tests/test-box.Rout.save (188 bytes security) (deflated 62%)
adding: tests/test-cluster.R (188 bytes security) (deflated 78%)
adding: tests/test-cluster.Rout.save (188 bytes security) (deflated 79%)
adding: tests/test-connect.R (188 bytes security) (deflated 77%)
adding: tests/test-connect.Rout.save (188 bytes security) (deflated 79%)
adding: tests/test-cut.R (188 bytes security) (deflated 60%)
adding: tests/test-cut.Rout.save (188 bytes security) (deflated 69%)
adding: tests/test-diclust.R (188 bytes security) (deflated 71%)
adding: tests/test-diclust.Rout.save (188 bytes security) (deflated 68%)
adding: tests/test-domains.R (188 bytes security) (deflated 77%)
adding: tests/test-domains.Rout.save (188 bytes security) (deflated 73%)
adding: tests/test-empty.R (188 bytes security) (deflated 51%)
adding: tests/test-empty.Rout.save (188 bytes security) (deflated 59%)
adding: tests/test-filter.R (188 bytes security) (deflated 73%)
adding: tests/test-filter.Rout.save (188 bytes security) (deflated 74%)
adding: tests/test-hic-pair.R (188 bytes security) (deflated 73%)
adding: tests/test-hic-pair.Rout.save (188 bytes security) (deflated 79%)
adding: tests/test-interactions.R (188 bytes security) (deflated 79%)
adding: tests/test-interactions.Rout.save (188 bytes security) (deflated 78%)
adding: tests/test-itercor.R (188 bytes security) (deflated 65%)
adding: tests/test-itercor.Rout.save (188 bytes security) (deflated 59%)
adding: tests/test-margin.R (188 bytes security) (deflated 77%)
adding: tests/test-margin.Rout.save (188 bytes security) (deflated 74%)
adding: tests/test-neighbor.R (188 bytes security) (deflated 70%)
adding: tests/test-neighbor.Rout.save (188 bytes security) (deflated 65%)
adding: tests/test-pair-manip.R (188 bytes security) (deflated 67%)
adding: tests/test-pair-manip.Rout.save (188 bytes security) (deflated 72%)