genomation 1.6.0 Altuna Akalin , Vedran Franke
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017) | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/genomation | Last Changed Rev: 122710 / Revision: 128728 | Last Changed Date: 2016-10-17 14:45:06 -0400 (Mon, 17 Oct 2016) |
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | |
tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |
morelia | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | WARNINGS | OK | |
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### Running command:
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### rm -rf genomation.buildbin-libdir && mkdir genomation.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.4/bioc/src/contrib/genomation_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=genomation.buildbin-libdir --merge-multiarch genomation_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL genomation_1.6.0.zip && rm genomation_1.6.0.tar.gz genomation_1.6.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 6124k 0 14355 0 0 117k 0 0:00:52 --:--:-- 0:00:52 117k
100 6124k 100 6124k 0 0 6070k 0 0:00:01 0:00:01 --:--:-- 6076k
install for i386
* installing *source* package 'genomation' ...
** libs
C:/Rtools/mingw_32/bin/g++ -std=c++0x -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.4-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/include" -I"C:/local323/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++ -std=c++0x -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.4-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/include" -I"C:/local323/include" -O2 -Wall -mtune=core2 -c idxstats.cpp -o idxstats.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o genomation.dll tmp.def RcppExports.o idxstats.o -LC:/Users/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/lib/i386 -lhts -lz -pthread -lws2_32 -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.4-bioc/meat/genomation.buildbin-libdir/genomation/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
'GenomationManual.Rmd' using 'UTF-8'
** testing if installed package can be loaded
install for x64
* installing *source* package 'genomation' ...
** libs
C:/Rtools/mingw_64/bin/g++ -std=c++0x -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.4-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/include" -I"C:/local323/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++ -std=c++0x -I"C:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.4-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/include" -I"C:/local323/include" -O2 -Wall -mtune=core2 -c idxstats.cpp -o idxstats.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o genomation.dll tmp.def RcppExports.o idxstats.o -LC:/Users/biocbuild/bbs-3.4-bioc/R/library/Rhtslib/lib/x64 -lhts -lz -pthread -lws2_32 -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.4-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.4-bioc/meat/genomation.buildbin-libdir/genomation/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'genomation' as genomation_1.6.0.zip
* DONE (genomation)
* installing to library 'C:/Users/biocbuild/bbs-3.4-bioc/R/library'
package 'genomation' successfully unpacked and MD5 sums checked