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BioC 3.4: INSTALL report for ggbio on tokay1

This page was generated on 2017-04-15 16:16:58 -0400 (Sat, 15 Apr 2017).

Package 527/1296HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ggbio 1.22.4
Michael Lawrence
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/ggbio
Last Changed Rev: 127452 / Revision: 128728
Last Changed Date: 2017-03-15 22:03:50 -0400 (Wed, 15 Mar 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: ggbio
Version: 1.22.4
Command: rm -rf ggbio.buildbin-libdir && mkdir ggbio.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.4/bioc/src/contrib/ggbio_1.22.4.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=ggbio.buildbin-libdir --merge-multiarch ggbio_1.22.4.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL ggbio_1.22.4.zip && rm ggbio_1.22.4.tar.gz ggbio_1.22.4.zip
StartedAt: 2017-04-14 18:21:02 -0400 (Fri, 14 Apr 2017)
EndedAt: 2017-04-14 18:21:35 -0400 (Fri, 14 Apr 2017)
EllapsedTime: 33.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf ggbio.buildbin-libdir && mkdir ggbio.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.4/bioc/src/contrib/ggbio_1.22.4.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=ggbio.buildbin-libdir --merge-multiarch ggbio_1.22.4.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL ggbio_1.22.4.zip  && rm ggbio_1.22.4.tar.gz ggbio_1.22.4.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 35 1308k   35  470k    0     0  2202k      0 --:--:-- --:--:-- --:--:-- 2207k
100 1308k  100 1308k    0     0  4156k      0 --:--:-- --:--:-- --:--:-- 4153k

install for i386

* installing *source* package 'ggbio' ...
** R
** inst
** preparing package for lazy loading
Warning: subclass "SymbolFilter" of class "BasicFilter" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning: subclass "OnlyCodingTx" of class "BasicFilter" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning: subclass "SymbolFilter" of class "BasicFilter" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Warning: subclass "OnlyCodingTx" of class "BasicFilter" is not local and cannot be updated for new inheritance information; consider setClassUnion()
Creating a new generic function for 'rescale' in package 'ggbio'
Creating a new generic function for 'xlim' in package 'ggbio'
Creating a new generic function for 'geom_rect' in package 'ggbio'
Creating a new generic function for 'geom_segment' in package 'ggbio'
Creating a new generic function for 'geom_bar' in package 'ggbio'
Creating a new generic function for 'stat_identity' in package 'ggbio'
Creating a new generic function for 'stat_bin' in package 'ggbio'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'ggbio' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ggbio' as ggbio_1.22.4.zip
* DONE (ggbio)
* installing to library 'C:/Users/biocbuild/bbs-3.4-bioc/R/library'
package 'ggbio' successfully unpacked and MD5 sums checked