BioC 3.4: BUILD report for saps on moscato1

Package: saps

Version: 2.5.2

Command: chmod a+r saps -R && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data saps

StartedAt: 2016-09-20 01:18:13 -0700 (Tue, 20 Sep 2016)

EndedAt: 2016-09-20 01:18:29 -0700 (Tue, 20 Sep 2016)

EllapsedTime: 15.8 seconds

RetCode: 1

Status:  ERROR

PackageFile: None

PackageFileSize: NA

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### Running command:
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###   chmod a+r saps -R && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data saps
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* checking for file 'saps/DESCRIPTION' ... OK
* preparing 'saps':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ...Warning: running command '"D:/biocbld/bbs-3.4-bioc/R/bin/x64/Rscript" --vanilla --default-packages= -e "tools::buildVignettes(dir = '.', tangle = TRUE)"' had status 1
 ERROR
Loading required package: survival
Calculating concordance index...done.
Using gene set set1, size = 5
gene set #1 of 2
Calculating P_pure...done.
Calculating P_random...done.
Calculating P_enrichment...Quitting from lines 76-77 (saps.Rmd) 
Error: processing vignette 'saps.Rmd' failed with diagnostics:
incorrect number of dimensions
Execution halted